RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 GTF2BQ00403 316 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 SMCO1Q147U7 214 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CA9Q16790 459 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 C2CD6Q53TS8 623 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 LIPNQ5VXI9 398 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 RPUSD3Q6P087 351 aaKnown RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZFP1Q6P2D0 407 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF767PQ75MW2 155 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PRSS42Q7Z5A4 293 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CROCCP2Q86T23 111 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 CBWD2Q8IUF1 395 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TMEM139Q8IV31 216 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 NUDCD3Q8IVD9 361 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ENTHD1Q8IYW4 607 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 LGI2Q8N0V4 545 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF781Q8N8C0 355 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF485Q8NCK3 441 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 LINC00301Q8NCQ3 95 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 RNASE11Q8TAA1 199 aaKnown RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF671Q8TAW3 534 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 WDR20Q8TBZ3 569 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PNPT1Q8TCS8 783 aaKnown RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ST7LQ8TDW4 575 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TMEM158Q8WZ71 300 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 OR1E3Q8WZA6 343 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 TNFRSF14Q92956 283 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 MOAP1Q96BY2 351 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 DACH2Q96NX9 599 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 RHNO1Q9BSD3 238 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PAPOLGQ9BWT3 736 aaKnown RBP4.27□□□□□ -1.73
ATXN3-218ENST00000553309 OR51M1Q9H341 326 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 Q9H521 79 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ZDHHC6Q9H6R6 413 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PELI2Q9HAT8 420 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 NT5MQ9NPB1 228 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 FBXO8Q9NRD0 319 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 B3GNT2Q9NY97 397 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PCDHGB4Q9UN71 923 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 PLCL2Q9UPR0 1127 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 AURKCQ9UQB9 309 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 NAALAD2Q9Y3Q0 740 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 ASB4Q9Y574 426 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 OR1A2Q9Y585 309 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 LYVE1Q9Y5Y7 322 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
ATXN3-218ENST00000553309 SONP18583 2426 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 A0A087X0M5 115 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 A0A1B0GX30 115 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SMIM23A6NLE4 172 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 LOC110117498-PIK3R3F6TDL0 507 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ABCD4O14678 606 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 AKR7A2O43488 359 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SPRY1O43609 319 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GPR137BO60478 399 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GPX5O75715 221 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ZWINTO95229 277 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PGLSO95336 258 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 OR2C1O95371 312 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PSMG1O95456 288 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 TNFP01375 233 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 IGLV1-44P01699 117 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 MBP02144 154 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SERPINA5P05154 406 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 FCER2P06734 321 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 FHP07954 510 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 RBP1P09455 135 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 STAG3L3P0CL85 134 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SMIM6P0DI80 62 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SMIM18P0DKX4 95 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 CBR1P16152 277 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 TNNI1P19237 187 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 IMPDH1P20839 514 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 CBLP22681 906 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 DNASE1P24855 282 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GIFP27352 417 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PTPN4P29074 926 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PRDX6P30041 224 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 RBMXP38159 391 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ACTR1BP42025 376 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SLC1A3P43003 542 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GNG10P50151 68 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PLK1P53350 603 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GMFBP60983 142 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 DCAF7P61962 342 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 SKP1P63208 163 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 CYP24A1Q07973 514 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ILF2Q12905 390 aaKnown RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 IL17AQ16552 155 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 PPP1R3AQ16821 1122 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 ASTE1Q2TB18 679 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 MS4A13Q5J8X5 152 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 TOR1AIP1Q5JTV8 583 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 DDI2Q5TDH0 399 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 KIAA0930Q6ICG6 404 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-218ENST00000553309 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
ATXN3-218ENST00000553309 UGT3A1Q6NUS8 523 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms