RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SAP18O00422 153 aaKnown RBP4.56□□□□□ -1.68
SCFD1-208ENST00000553278 PPP1R2P9O14990 202 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 EDIL3O43854 480 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 KRT34O76011 436 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 TSPAN13O95857 204 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 FGF1P05230 155 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 STSP08842 583 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 UBCP0CG48 685 aaKnown RBP4.56□□□□□ -1.68
SCFD1-208ENST00000553278 PRR23D2P0DMB1 279 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-208ENST00000553278 NPR2P20594 1047 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 BCKDHBP21953 392 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 DCKP27707 260 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 LONP1P36776 959 aaKnown RBP4.56□□□□□ -1.68
SCFD1-208ENST00000553278 GSSP48637 474 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 RPL34P49207 117 aaKnown RBP4.56□□□□□ -1.68
SCFD1-208ENST00000553278 BIDP55957 195 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 HILS1P60008 231 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 RAD51Q06609 339 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 SERTAD2Q14140 314 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 OR52W1Q6IF63 320 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 TTC23LQ6PF05 361 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 ZNF836Q6ZNA1 936 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 STXBP4Q6ZWJ1 553 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 FRA10AC1Q70Z53 315 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 IQCKQ8N0W5 287 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 MS4A15Q8N5U1 240 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 CSGALNACT2Q8N6G5 542 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 OR5T3Q8NGG3 340 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 OR6T1Q8NGN1 323 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 OR2A12Q8NGT7 310 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 CCDC26Q8TAB7 109 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 ITLN1Q8WWA0 313 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 FGF11Q92914 225 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 POM121L2Q96KW2 1035 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 OR8B4Q96RC9 309 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 TRIM51Q9BSJ1 452 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 SYT11Q9BT88 431 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 LRRC61Q9BV99 259 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 SRXN1Q9BYN0 137 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 ADNPQ9H2P0 1102 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 OR51M1Q9H341 326 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 PANK3Q9H999 370 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 FOLH1BQ9HBA9 442 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 TMEM165Q9HC07 324 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 MROH7-TTC4A0A0A0MT08 1334 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 IGHV3OR16-10A0A075B7F0 116 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SERPINE3A8MV23 424 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 CCL21O00585 134 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SH3BGRLO75368 114 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 PIGRP01833 764 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 KLK3P07288 261 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-208ENST00000553278 CFC1BP0CG36 223 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 CFC1P0CG37 223 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 RBMY1CP0DJD4 496 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 DPEP1P16444 411 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 VDAC1P21796 283 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SLC2A5P22732 501 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SHMT2P34897 504 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 CLDN18P56856 261 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 LMO4P61968 165 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 ERVK-25P63136 954 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 NSUN5P1Q3KNT7 163 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 PARP15Q460N3 678 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 PPM1LQ5SGD2 360 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 GPRC6AQ5T6X5 926 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 LIN9Q5TKA1 542 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 MLIPQ5VWP3 458 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SCARA5Q6ZMJ2 495 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 ZNF600Q6ZNG1 722 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 Q6ZSR3 168 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 C18orf65Q6ZTR6 163 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 ARCQ7LC44 396 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 ASCL5Q7RTU5 278 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 ABHD12Q8N2K0 398 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 LIX1Q8N485 282 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 TTC29Q8NA56 475 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-208ENST00000553278 RAB1CQ92928 201 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 CIDECQ96AQ7 238 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-208ENST00000553278 JSRP1Q96MG2 331 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-208ENST00000553278 MS4A4EQ96PG1 132 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 XPO6Q96QU8 1125 aaKnown RBP4.55□□□□□ -1.68
SCFD1-208ENST00000553278 OR5M11Q96RB7 305 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SORT1Q99523 831 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 SH3GL1Q99961 368 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 KLHDC3Q9BQ90 382 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 FAIM2Q9BWQ8 316 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 DYRK4Q9NR20 520 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 AGPAT3Q9NRZ7 376 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 GIN1Q9NXP7 522 aa4.55□□□□□ -1.68
SCFD1-208ENST00000553278 UXTQ9UBK9 157 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-208ENST00000553278 CDHR2Q9BYE9 1310 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 TRAV9-2A0A087WT02 112 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 LOC100506127A0A0U1RQW1 187 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 A0A1B0GUH1 482 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 EPM2AB3EWF7 344 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 M0R3G1 203 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 MBTPS2O43462 519 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 KBTBD11O94819 623 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 CCNB2O95067 398 aa4.54□□□□□ -1.68
SCFD1-208ENST00000553278 NPPAP01160 153 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms