RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 OR2T7P0C7T2 308 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 IFNGR1P15260 489 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZP3P21754 424 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 CDK2P24941 298 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 CMPK1P30085 196 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 GABRA3P34903 492 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 MAP3K8P41279 467 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 MMP16P51512 607 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 H2BFSP57053 126 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ACTA2P62736 377 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ACTG2P63267 376 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 MGAT2Q10469 447 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SRSF5Q13243 272 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 GAS6Q14393 721 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 HLXQ14774 488 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF626Q68DY1 528 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 RPL22L1Q6P5R6 122 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 USP53Q70EK8 1073 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 C12orf76Q8N812 135 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF614Q8N883 585 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 NPEPL1Q8NDH3 523 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR4N2Q8NGD1 307 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR5M1Q8NGP8 315 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR2T27Q8NH04 317 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 COQ8AQ8NI60 647 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FLVCR1-AS1Q8TAF5 88 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SYNPRQ8TBG9 265 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SNX33Q8WV41 574 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ST8SIA4Q92187 359 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 PMEPA1Q969W9 287 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR2A7Q96R45 310 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 CNN2Q99439 309 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 AIFM2Q9BRQ8 373 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TIMM29Q9BSF4 260 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TMPRSS13Q9BYE2 586 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 MED9Q9NWA0 146 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TAS2R5Q9NYW4 299 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 KLHL9Q9P2J3 617 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FBXL3Q9UKT7 428 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 DAPP1Q9UN19 280 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 A0A1B0GVT2 93 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR6C65A6NJZ3 312 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ATP6V1G2-DDX39BF2Z307 99 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 H3BSH0 61 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ARPC5O15511 151 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SULT1B1O43704 296 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 IGKV1D-16P01601 117 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FCER2P06734 321 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 GIPP09681 153 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 NFYAP23511 347 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 AK4P27144 223 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SLC6A6P31641 620 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 PSMA6P60900 246 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 RAP2BP61225 183 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ILF3Q12906 894 aaKnown RBP eCLIP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 CBFBQ13951 182 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 GGTLC2Q14390 218 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZMYND11Q15326 602 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 NDUFAF6Q330K2 333 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FAM78AQ5JUQ0 283 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 DCAF12L2Q5VW00 463 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OLFML2AQ68BL7 652 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR7E24Q6IFN5 339 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FAM122CQ6P4D5 195 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ARHGAP11AQ6P4F7 1023 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF613Q6PF04 617 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ATRAIDQ6UW56 229 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 KIRREL2Q6UWL6 708 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 BIVMQ86UB2 503 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SLC43A2Q8N370 569 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 POMGNT2Q8NAT1 580 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR4D10Q8NGI6 311 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR52H1Q8NGJ2 320 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR14A16Q8NHC5 309 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 CCL4L1Q8NHW4 92 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 RPS4Y2Q8TD47 263 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FCAMRQ8WWV6 532 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 RASD2Q96D21 266 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF578Q96N58 590 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TOX2Q96NM4 488 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TSSK2Q96PF2 358 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR2A5Q96R48 311 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FGF22Q9HCT0 170 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 CD93Q9NPY3 652 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 EXOSC3Q9NQT5 275 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 DUSP22Q9NRW4 184 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 DNAJB12Q9NXW2 375 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TBC1D29Q9UFV1 150 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 FBXL21Q9UKT6 434 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SLC17A4Q9Y2C5 497 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 KLHDC2Q9Y2U9 406 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SLC22A7Q9Y694 548 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 F5P12259 2224 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 ANXA2P2A6NMY6 339 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 SNRPGP15A8MWD9 76 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 A8MXK9 166 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 H0YC42 278 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 PDCD5O14737 125 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 GPRIN2O60269 458 aa4.95□□□□□ -1.62
LIMA1-212ENST00000552491 SERPINI2O75830 405 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms