RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480		H3BML4	177 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	RNF13	O43567	381 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR6A2	O95222	327 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	IGHM	P01871	453 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	IGHA1	P01876	353 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	F13B	P05160	661 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	IMPDH2	P12268	514 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	MYL12A	P19105	171 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	CNR1	P21554	472 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	CD96	P40200	585 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	RPS7	P62081	194 aa	Known RBP	11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	LGALS3BP	Q08380	585 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZP4	Q12836	540 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR7A5	Q15622	319 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	TIGD6	Q17RP2	521 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	KLHL12	Q53G59	568 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	LCN1P1	Q5VSP4	162 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	ANKRD13B	Q86YJ7	626 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	ALDH16A1	Q8IZ83	802 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	GALNT16	Q8N428	558 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	NANOGP1	Q8N7R0	232 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	NPEPL1	Q8NDH3	523 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	ATP6V1C2	Q8NEY4	427 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	PROKR2	Q8NFJ6	384 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	RAB2B	Q8WUD1	216 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	NXPE2	Q96DL1	559 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	DNAJA3	Q96EY1	480 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480		Q96M85	177 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	COG8	Q96MW5	612 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	GNRHR2	Q96P88	292 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	DDO	Q99489	341 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	TEAD3	Q99594	435 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	FUNDC2	Q9BWH2	189 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	NMNAT2	Q9BZQ4	307 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR51V1	Q9H2C8	321 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	CHST11	Q9NPF2	352 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	CHCHD3	Q9NX63	227 aa	Known RBP	11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	ALKBH4	Q9NXW9	302 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	HAO2	Q9NYQ3	351 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	TNFRSF10D	Q9UBN6	386 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	GRHPR	Q9UBQ7	328 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	SEC14L4	Q9UDX3	406 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	WDR87	Q6ZQQ6	2873 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	TMEM129	A0AVI4	362 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	LRRC3C	A6NJW4	275 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	C11orf98	E9PRG8	122 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	MYL12B	O14950	172 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZIC3	O60481	467 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	GFRA3	O60609	400 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	NEURL1	O76050	574 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	APOL3	O95236	402 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	TCEA1	P23193	301 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	SRD5A2	P31213	254 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	TGFBR2	P37173	567 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	ETV1	P50549	477 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	SLC25A1	P53007	311 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	POU4F2	Q12837	409 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	MYBPH	Q13203	477 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	KRR1	Q13601	381 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	TBC1D25	Q3MII6	688 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	SLC35D3	Q5M8T2	416 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	LEG1	Q6P5S2	330 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	H1FNT	Q75WM6	255 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	SHF	Q7M4L6	423 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	ADPRHL1	Q8NDY3	354 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR4F15	Q8NGB8	312 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR5M1	Q8NGP8	315 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR9Q1	Q8NGQ5	310 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	C12orf43	Q96C57	262 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	NMD3	Q96D46	503 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR5M11	Q96RB7	305 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	SNX18	Q96RF0	628 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	NMNAT3	Q96T66	252 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	FAM173A	Q9BQD7	235 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	BCL7B	Q9BQE9	202 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	PIGQ	Q9BRB3	760 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	NAA50	Q9GZZ1	169 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	TXNIP	Q9H3M7	391 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	DEPP	Q9NTK1	212 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	PTTG2	Q9NZH5	202 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	CLEC2D	Q9UHP7	191 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	ENPP5	Q9UJA9	477 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZNF346	Q9UL40	294 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	BOK	Q9UMX3	212 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	HDGFL3	Q9Y3E1	203 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480	PCNX3	Q9H6A9	2034 aa		11.43	□□□□□ -0.58
CACNB3-223	ENST00000552480		A0A1W2PRG6	482 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	OR6C68	A6NDL8	312 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	NPIPB13	A6NJU9	1138 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	NPIPB4	C9JG80	1138 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480		H3BMQ9	156 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480		J3QRE1	110 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	GABARAP	O95166	117 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	WDPCP	O95876	746 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	CLU	P10909	449 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	SPI1	P17947	270 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	GSTT1	P30711	240 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	ATP6V1E1	P36543	226 aa		11.42	□□□□□ -0.58
CACNB3-223	ENST00000552480	CDKN2A	P42771	156 aa	Known RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms