RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TMEM225Q6GV28 225 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 WBP2NLQ6ICG8 309 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 FAM166AQ6J272 317 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 WDR93Q6P2C0 686 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 ZNF621Q6ZSS3 439 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 CREB3L2Q70SY1 520 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 GPAT4Q86UL3 456 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 TMEM99Q8N816 258 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 FAM169BQ8N8A8 192 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 GLB1L3Q8NCI6 653 aaPredicted RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 PNPT1Q8TCS8 783 aaKnown RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 MAGEE2Q8TD90 523 aaPredicted RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 FBXO17Q96EF6 278 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 SORCS2Q96PQ0 1159 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 SLC38A2Q96QD8 506 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 ZBTB18Q99592 522 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 KCNS3Q9BQ31 491 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 PIMREGQ9BSJ6 248 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 TAPBPLQ9BX59 468 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 CA10Q9NS85 328 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 THUMPD1Q9NXG2 353 aaKnown RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 FBXO9Q9UK97 447 aaPredicted RBP6.64□□□□□ -1.35
NEK3-201ENST00000550331 KCNS2Q9ULS6 477 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 RASD1Q9Y272 281 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 GPR45Q9Y5Y3 372 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 CADP27708 2225 aa6.64□□□□□ -1.35
NEK3-201ENST00000550331 LOC390937A0A1W2PQ73 354 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 TRPC5OSA6NMA1 111 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 B9A039 149 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 SDHDO14521 159 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 KLF11O14901 512 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 HDAC3O15379 428 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 FRS3O43559 492 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 FZD7O75084 574 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 NPIPB7O75200 414 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 LY6HO94772 140 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 IGLV1-44P01699 117 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 IL6P05231 212 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 GSNP06396 782 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 TFPTP0C1Z6 253 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 GKN3PP0CG01 181 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ZCCHC18P0CG32 403 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 SRD5A1P18405 259 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 CDH2P19022 906 aaPredicted RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 IGFBP5P24593 272 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 IL12AP29459 219 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 SERPINF1P36955 418 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ACAA2P42765 397 aaKnown RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 PPOXP50336 477 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 P2RY4P51582 365 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 MVDP53602 400 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 SH3BGRP55822 239 aaPredicted RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 NME5P56597 212 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 UBE2NP61088 152 aaKnown RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 COPZ1P61923 177 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 BST1Q10588 318 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 TBRG1Q3YBR2 411 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 TNFAIP8L3Q5GJ75 292 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 C1orf140Q5VVS0 124 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 PRAMEF8Q5VWM4 474 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 PRAMEF7Q5VXH5 474 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ANKRD16Q6P6B7 361 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ZNF836Q6ZNA1 936 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 SLC46A3Q7Z3Q1 461 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 VRK2Q86Y07 508 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 CADM2Q8N3J6 435 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ZNF540Q8NDQ6 660 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 OR1K1Q8NGR3 316 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 OR52P1PQ8NH57 321 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 STK35Q8TDR2 534 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 AURKBQ96GD4 344 aaPredicted RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 ALKBH3Q96Q83 286 aaPredicted RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 LINC00470Q9BZP3 86 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 PCNX3Q9H6A9 2034 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ARMC7Q9H6L4 198 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 CACYBPQ9HB71 228 aaKnown RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 PNPOQ9NVS9 261 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 RLIMQ9NVW2 624 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 ADPRHL2Q9NX46 363 aa6.63□□□□□ -1.35
NEK3-201ENST00000550331 CRNNQ9UBG3 495 aaPredicted RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 ZNF443Q9Y2A4 671 aaPredicted RBP6.63□□□□□ -1.35
NEK3-201ENST00000550331 A0A0G2JPF8 293 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 LOC100289279A0A1B0GTE1 492 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 TMEM247A6NEH6 219 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 TMEM229AB2RXF0 380 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 HNRNPCL2B2RXH8 293 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 HNRNPCL3B7ZW38 293 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 FTCDNL1E5RQL4 147 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 SLCO1B7G3V0H7 640 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 SPRY1O43609 319 aaPredicted RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 HNRNPCL1O60812 293 aaKnown RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 AHSA1O95433 338 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 LGI1O95970 557 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 IGKV3-15P01624 115 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 BCHEP06276 602 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 OR4A8P0C604 315 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 HNRNPCL4P0DMR1 293 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 APEHP13798 732 aaKnown RBP6.62□□□□□ -1.35
NEK3-201ENST00000550331 ETFAP13804 333 aa6.62□□□□□ -1.35
NEK3-201ENST00000550331 IDO1P14902 403 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms