RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 LHX9Q9NQ69 397 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 INPP5EQ9NRR6 644 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 SCN2AQ99250 2005 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 IMPA2O14732 288 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 GRM6O15303 877 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 PIN1P1O15428 100 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 EMC8O43402 210 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 SNAPC5O75971 98 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 SNAPINO95295 136 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 AMY2AP04746 511 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 AGTR1P30556 359 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 CALCRP30988 508 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 MNDAP41218 407 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 FXYD6P3P58550 94 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 PEA15Q15121 130 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 OR1Q1Q15612 314 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 FIGNL1Q6PIW4 674 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 ZNF836Q6ZNA1 936 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 RNF44Q7L0R7 432 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 TMEM25Q86YD3 366 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 OR51D1Q8NGF3 324 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 NKD1Q969G9 470 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 C14orf79Q96F83 325 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 ARHGDIGQ99819 225 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 ULBP3Q9BZM4 244 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 GPN3Q9UHW5 284 aaPredicted RBP11.13□□□□□ -0.63
VDR-208ENST00000550325 ZNF346Q9UL40 294 aaKnown RBP11.13□□□□□ -0.63
VDR-208ENST00000550325 A0A0B4J2A0 478 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 A0A1B0GTH9 108 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 A0A1W2PR48 441 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 C5orf51A6NDU8 294 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 LATO43561 262 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 TIMP2P16035 220 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 DPP4P27487 766 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 CD34P28906 385 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 EPHB3P54753 998 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 SKP1P63208 163 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 PRKCZQ05513 592 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 PON3Q15166 354 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 KRBOX4Q5JUW0 171 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 FAM129CQ86XR2 697 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 FIBINQ8TAL6 211 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 PHOSPHO1Q8TCT1 267 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 SLC35A4Q96G79 324 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 SPSB2Q99619 263 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 APMAPQ9HDC9 416 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 SHPKQ9UHJ6 478 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
VDR-208ENST00000550325 A0A0D9SG52 128 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 TRAPPC13A5PLN9 417 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 POM121BA6NF01 834 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 OR2T1O43869 369 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 FOSL1P15407 271 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 ZNF14P17017 642 aaPredicted RBP11.13□□□□□ -0.63
VDR-208ENST00000550325 VEGFBP49765 207 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 CAPZA1P52907 286 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 OTPQ5XKR4 325 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 GLT8D1Q68CQ7 371 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 RHOUQ7L0Q8 258 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 GAS2L1Q99501 681 aaPredicted RBP11.13□□□□□ -0.63
VDR-208ENST00000550325 CALML5Q9NZT1 146 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 ADAM18Q9Y3Q7 739 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 IER3IP1Q9Y5U9 82 aa11.13□□□□□ -0.63
VDR-208ENST00000550325 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 C1orf196B1AJZ1 125 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 OR8G3PP0DMU2 310 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 C6P13671 934 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ADCYAP1P18509 176 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 FAM219AQ8IW50 185 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 LNX2Q8N448 690 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 C2orf15Q8WU43 125 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 RSRP1Q9BUV0 290 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 PITHD1Q9GZP4 211 aaPredicted RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 MRPL17Q9NRX2 175 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 TM7SF3Q9NS93 570 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 C2orf42Q9NWW7 574 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 MYO7AQ13402 2215 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 TMEM82A0PJX8 343 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 AIFM1O95831 613 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 ATP1B3P54709 279 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 AIMP2Q13155 320 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 RPL22L1Q6P5R6 122 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 ZNF704Q6ZNC4 412 aaPredicted RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 UBE3DQ7Z6J8 389 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 OR1J2Q8NGS2 313 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 WDR34Q96EX3 536 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 GFI1Q99684 422 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 WDR77Q9BQA1 342 aaPredicted RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 TRAV14DV4A0A0A6YYC5 116 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 A0A1W2PRU2 124 aa11.12□□□□□ -0.63
VDR-208ENST00000550325 HLA-AP01891 365 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 DCNP07585 359 aaKnown RBP11.12□□□□□ -0.63
VDR-208ENST00000550325 OR4E1P0C645 316 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms