RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PLA2G7Q13093 441 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ETFDHQ16134 617 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF660Q6AZW8 331 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-228ENST00000548938 C17orf107Q6ZR85 190 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 HSD17B13Q7Z5P4 300 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-228ENST00000548938 NAXDQ8IW45 347 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF614Q8N883 585 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 HAVCR1Q96D42 359 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 RSPRY1Q96DX4 576 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.4
HDAC7-228ENST00000548938 IER3IP1Q9Y5U9 82 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 A0A0B4J2E0 115 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 A0A1B0GX12 115 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 MCIDASD6RGH6 385 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 GOSR2O14653 212 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 SULT1B1O43704 296 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 GPRIN2O60269 458 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 SPDEFO95238 335 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 APOC3P02656 99 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 PBX2P40425 430 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 GGTLC2Q14390 218 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 SHHQ15465 462 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF425Q6IV72 752 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZC3H14Q6PJT7 736 aaKnown RBP12.58□□□□□ -0.4
HDAC7-228ENST00000548938 PDZD9Q8IXQ8 264 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 OR6K6Q8NGW6 343 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 OR14A16Q8NHC5 309 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZPLD1Q8TCW7 415 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 ZDHHC1Q8WTX9 485 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 GAL3ST3Q96A11 431 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 RAB11FIP5Q9BXF6 653 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 TRPV4Q9HBA0 871 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 TMEM27Q9HBJ8 222 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 MED11Q9P086 117 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 SERTAD3Q9UJW9 196 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.4
HDAC7-228ENST00000548938 PCP4L1A6NKN8 68 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 NDUFA2O43678 99 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 KDM4BO94953 1096 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 POU2F2P09086 479 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 AK4P27144 223 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 VIPR2P41587 438 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 GXYLT1Q4G148 440 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 DEFB134Q4QY38 66 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF613Q6PF04 617 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 SLC36A1Q7Z2H8 476 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 MRPS24Q96EL2 167 aaKnown RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 ZMAT5Q9UDW3 170 aaKnown RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF281Q9Y2X9 895 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 TP53BP1Q12888 1972 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 A0A1B0GVT2 93 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 GXYLT2A0PJZ3 443 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 UBE2QL1A1L167 161 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF860A6NHJ4 632 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 F5H5P2 479 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 SDC3O75056 442 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 RLN2P04090 185 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 RLN1P04808 185 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 CD1AP06126 327 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 ADRA2CP18825 462 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 CMPK1P30085 196 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 MRPS10P82664 201 aaKnown RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 GAS6Q14393 721 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 CDH26Q8IXH8 852 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 RELL2Q8NC24 303 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 OR4D10Q8NGI6 311 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 OR4C16Q8NGL9 310 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 OR5M9Q8NGP3 310 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 OR10Z1Q8NGY1 313 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 RAB40AQ8WXH6 277 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
HDAC7-228ENST00000548938 C19orf53Q9UNZ5 99 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-228ENST00000548938 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-228ENST00000548938 LRRC72A6NJI9 287 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 D6RAR5 112 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 PLATP00750 562 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 CPMP14384 443 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 ART1P52961 327 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 RUNX2Q13950 521 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 UBXN2BQ14CS0 331 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 EXOSC7Q15024 291 aaKnown RBP12.56□□□□□ -0.4
HDAC7-228ENST00000548938 PON3Q15166 354 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 TCEA2Q15560 299 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 PCGF3Q3KNV8 242 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 FHL5Q5TD97 284 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 ETFBKMTQ8IXQ9 262 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 MUC20Q8N307 709 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-228ENST00000548938 OR2AK2Q8NG84 335 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 PHYHIPQ92561 330 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 RNF166Q96A37 237 aaPredicted RBP12.56□□□□□ -0.4
HDAC7-228ENST00000548938 TEX101Q9BY14 249 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 CAPN10Q9HC96 672 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
HDAC7-228ENST00000548938 ITPKBP27987 946 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms