RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TRGV8A0A0C4DH27 118 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 A0A1W2PPV9 198 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 TCRBV9S1A1TA0A576 114 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 SAGE2PA6NJ88 616 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 LRRIQ3A6PVS8 624 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 G3V2L1 256 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PDHXO00330 501 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 AIM2O14862 343 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 TFECO14948 347 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 POLR1CO15160 346 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 EIF3HO15372 352 aaKnown RBP eCLIP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 FGFR1OPO95684 399 aaKnown RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 OXSR1O95747 527 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 SNAI1O95863 264 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 LGALS2P05162 132 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ANXA5P08758 320 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 SELEP16581 610 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 POLR2EP19388 210 aaKnown RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PRDX3P30048 256 aaKnown RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 SPRP35270 261 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ACVR1BP36896 505 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ELK3P41970 407 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ARHGDIAP52565 204 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 RIPK4P57078 832 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PUDPQ08623 228 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 SCRN3Q0VDG4 424 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 VGLL4Q14135 290 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 MRPL23Q16540 153 aaKnown RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 TIGITQ495A1 244 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 EIPR1Q53HC9 387 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 BSPRYQ5W0U4 402 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 FAM219BQ5XKK7 198 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 SLC22A10Q63ZE4 541 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PWWP2BQ6NUJ5 590 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 CARM1Q86X55 608 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 RNF130Q86XS8 419 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 VRK2Q86Y07 508 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 OR2L13Q8N349 312 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 METTL4Q8N3J2 472 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PQLC3Q8N755 202 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF519Q8TB69 540 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF596Q8TC21 504 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 FAM110BQ8TC76 370 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 MARCH1Q8TCQ1 289 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 LKAAEAR1Q8TD35 194 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 MRGPRDQ8TDS7 321 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 HTR3CQ8WXA8 447 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 OR1E3Q8WZA6 343 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 RAB1CQ92928 201 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF524Q96C55 264 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 FAF2Q96CS3 445 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF501Q96CX3 271 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 ATXN7L3BQ96GX2 97 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 TMEM80Q96HE8 168 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 LGMNQ99538 433 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 HSD17B14Q9BPX1 270 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 RBKSQ9H477 322 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 FBXO44Q9H4M3 255 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 REEP4Q9H6H4 257 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 NIPAL2Q9H841 368 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 MEPEQ9NQ76 525 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 EHFQ9NZC4 300 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 CPQQ9Y646 472 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PAPPAQ13219 1627 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 CICQ96RK0 1608 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-210ENST00000547654 NRXN3Q9Y4C0 1643 aa3.48□□□□□ -1.85
SCAF11-210ENST00000547654 PEAK1Q9H792 1746 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 IGHV3-38A0A0C4DH36 116 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 A0A1B0GUH1 482 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 TEX48A0A1B0GUV7 120 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PP2D1A8MPX8 630 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 C12orf71A8MTZ7 269 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 IDSB3KWA1 339 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 GNA14O95837 355 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 CD55P08174 381 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 CD48P09326 243 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 MYL2P10916 166 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PVRP15151 417 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF43P17038 809 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 COX5AP20674 150 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 CHRNB4P30926 498 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 ARRB1P49407 418 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 RIDAP52758 137 aaKnown RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF154Q13106 437 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PPIL2Q13356 520 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 IL18R1Q13478 541 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF77Q15935 545 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF829Q3KNS6 432 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 C14orf28Q4W4Y0 310 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 LINC00242Q5T6M2 205 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 C22orf42Q6IC83 251 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 FAM199XQ6PEV8 388 aaPredicted RBP3.47□□□□□ -1.85
SCAF11-210ENST00000547654 SASS6Q6UVJ0 657 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 PGAP1Q75T13 922 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 NIPA1Q7RTP0 329 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 FAM58AQ8N1B3 248 aa3.47□□□□□ -1.85
SCAF11-210ENST00000547654 SUMF1Q8NBK3 374 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms