RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RDH16O75452 317 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ATG12O94817 140 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 RLN2P04090 185 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF28P17035 718 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 FAM53BQ14153 422 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 FAM74A3Q4VXF1 159 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ETFBKMTQ8IXQ9 262 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 TMEM52Q8NDY8 209 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF75AQ96N20 296 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 MED18Q9BUE0 208 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ATG5Q9H1Y0 275 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 SLC39A1Q9NY26 324 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 CLEC1BQ9P126 229 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 NOP16Q9Y3C1 178 aaKnown RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ASB4Q9Y574 426 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 FREM2Q5SZK8 3169 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 SVILO95425 2214 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 WDFY4Q6ZS81 3184 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 UBL3O95164 117 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 APODP05090 189 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 CT62P0C5K7 136 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 EFNB2P52799 333 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 TMEM205Q6UW68 189 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 OR52N1Q8NH53 320 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 WFIKKN2Q8TEU8 576 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ATOH1Q92858 354 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 KIAA1143Q96AT1 154 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 SLC7A5P2Q9GIP4 190 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 NRSN2Q9GZP1 204 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ADGRL4Q9HBW9 690 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ACSS1Q9NUB1 689 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 CGGBP1Q9UFW8 167 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ZFPL1O95159 310 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 TLX1P31314 330 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 TAGLNQ01995 201 aaKnown RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ELAVL3Q14576 367 aaKnown RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF169Q14929 603 aaPredicted RBP13.45□□□□□ -0.26
HOXC11-202ENST00000546378 COL28A1Q2UY09 1125 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 AMZ1Q400G9 498 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 OLFML2AQ68BL7 652 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 COMMD2Q86X83 199 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 NRROSQ86YC3 692 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 TMEM185AQ8NFB2 350 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 NSMAFQ92636 917 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 SPACA7Q96KW9 195 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 SPACA5Q96QH8 159 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 EMC7Q9NPA0 242 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ASF1BQ9NVP2 202 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 TBC1D29Q9UFV1 150 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 NDOR1Q9UHB4 597 aa13.45□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF705EA8MWA4 302 aaPredicted RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 E9PQ18 207 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 ARL6IP5O75915 188 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 PAPLNO95428 1278 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 DRD2P14416 443 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 FCARP24071 287 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 CMPK1P30085 196 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 LUMP51884 338 aaPredicted RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 REEP5Q00765 189 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 FZD5Q13467 585 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 RUNX2Q13950 521 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 MFSD13AQ14CX5 517 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 CD276Q5ZPR3 534 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 SDR16C5Q8N3Y7 309 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 OR4S1Q8NGB4 309 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 ANGPTL6Q8NI99 470 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 TMEM106AQ96A25 262 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 SLC25A28Q96A46 364 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 GPR137Q96N19 417 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 MTHFD2LQ9H903 347 aaPredicted RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 KLHL9Q9P2J3 617 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 PPIL1Q9Y3C6 166 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 PCDHGA9Q9Y5G4 932 aaKnown RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 RPS10-NUDT3A0A1W2PQS6 291 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 FARS2O95363 451 aaKnown RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 IFNGP01579 166 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 NGFRP08138 427 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 MNDAP41218 407 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 NANOS3P60323 173 aaKnown RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 PITPNAQ00169 270 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 CBFBQ13951 182 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 FAM181AQ8N9Y4 354 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 OR52R1Q8NGF1 315 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 SORCS2Q96PQ0 1159 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 DMRTA2Q96SC8 542 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 CNN2Q99439 309 aaKnown RBP13.44□□□□□ -0.26
HOXC11-202ENST00000546378 SLC6A7Q99884 636 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 PPA2Q9H2U2 334 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 DPEP2Q9H4A9 486 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 FGF22Q9HCT0 170 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 C2orf42Q9NWW7 574 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 COPZ2Q9P299 210 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 MLXQ9UH92 298 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 HRH3Q9Y5N1 445 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 KIF26BQ2KJY2 2108 aa13.44□□□□□ -0.26
HOXC11-202ENST00000546378 HEATR5AQ86XA9 2040 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms