RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SPATA19Q7Z5L4 167 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 ABHD12BQ7Z5M8 362 aaPredicted RBP10.86□□□□□ -0.67
COPS7A-221ENST00000546229 CDK20Q8IZL9 346 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 ZCCHC24Q8N2G6 241 aaKnown RBP10.86□□□□□ -0.67
COPS7A-221ENST00000546229 TRIML2Q8N7C3 387 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 MFSD8Q8NHS3 518 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 STK35Q8TDR2 534 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 TMEM19Q96HH6 336 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 OR52E6Q96RD3 313 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 WDR55Q9H6Y2 383 aaPredicted RBP10.86□□□□□ -0.67
COPS7A-221ENST00000546229 ADPRHL2Q9NX46 363 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 P2RX2Q9UBL9 471 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 RASD1Q9Y272 281 aa10.86□□□□□ -0.67
COPS7A-221ENST00000546229 A0A096LPI6 279 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 OR6C65A6NJZ3 312 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 CRYAAP02489 173 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 BCHEP06276 602 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 BMP2P12643 396 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-221ENST00000546229 UQCRBP14927 111 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 CBR1P16152 277 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 PAX7P23759 505 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 HTR2AP28223 471 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 EPHA3P29320 983 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 THBS4P35443 961 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-221ENST00000546229 LRRC74AQ0VAA2 488 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 GNA13Q14344 377 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 PHYHD1Q5SRE7 291 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 ZNF621Q6ZSS3 439 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 ZNF627Q7L945 461 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 MEX3DQ86XN8 651 aaKnown RBP10.85□□□□□ -0.67
COPS7A-221ENST00000546229 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 C10orf111Q8N326 155 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 KDM8Q8N371 416 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 CADM2Q8N3J6 435 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 OR4F15Q8NGB8 312 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 SLC35B4Q969S0 331 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 KTI12Q96EK9 354 aaPredicted RBP10.85□□□□□ -0.67
COPS7A-221ENST00000546229 SPATA9Q9BWV2 254 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 GPR35Q9HC97 309 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 B3GNT2Q9NY97 397 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 ZNF224Q9NZL3 707 aa10.85□□□□□ -0.67
COPS7A-221ENST00000546229 TRRAPQ9Y4A5 3859 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 TGFAP01135 160 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 NUDT7P0C024 238 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 DAOP14920 347 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 ANXA11P50995 505 aaKnown RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 CDH15P55291 814 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 WDR4P57081 412 aaKnown RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 DSTNP60981 165 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 ARF1P84077 181 aaKnown RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 HOXC5Q00444 222 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 TRIP10Q15642 601 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 KRT71Q3SY84 523 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 PDCD4Q53EL6 469 aaKnown RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 TMEM225Q6GV28 225 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 VHLLQ6RSH7 139 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 MDP1Q86V88 176 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 ZNF786Q8N393 782 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 SVOPLQ8N434 492 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 GLB1L3Q8NCI6 653 aaPredicted RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 SEMA6DQ8NFY4 1073 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 OR9I1Q8NGQ6 314 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 HPS1Q92902 700 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 VRK1Q99986 396 aaPredicted RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 RACGAP1Q9H0H5 632 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 TPT1P8Q9HAU6 139 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 BCL2L10Q9HD36 194 aa10.84□□□□□ -0.67
COPS7A-221ENST00000546229 SDR39U1Q9NRG7 319 aaPredicted RBP10.84□□□□□ -0.67
COPS7A-221ENST00000546229 LOC102725191A0A1B0GVB3 256 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 M0R082 166 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 RFXANKO14593 260 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 KRT75O95678 551 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 HPRP00739 348 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 CRISP3P54108 245 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 CLDN17P56750 224 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
COPS7A-221ENST00000546229 STX3Q13277 289 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 ELFN2Q5R3F8 820 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 MSRB3Q8IXL7 192 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 ADPRHL1Q8NDY3 354 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF417Q8TAU3 575 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 TAAR8Q969N4 342 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 SLC41A3Q96GZ6 507 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF587Q96SQ5 575 aaPredicted RBP10.83□□□□□ -0.68
COPS7A-221ENST00000546229 TAPBPLQ9BX59 468 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 PAIP1Q9H074 479 aaKnown RBP10.83□□□□□ -0.68
COPS7A-221ENST00000546229 C12orf10Q9HB07 376 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 MOV10Q9HCE1 1003 aaKnown RBP10.83□□□□□ -0.68
COPS7A-221ENST00000546229 A4GALTQ9NPC4 353 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 CALML5Q9NZT1 146 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 KLHL14Q9P2G3 628 aa10.83□□□□□ -0.68
COPS7A-221ENST00000546229 PKD1L1Q8TDX9 2849 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 CMYA5Q8N3K9 4069 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms