RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 OPN4Q9UHM6 478 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 MYO7AQ13402 2215 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 LRP4O75096 1905 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ARPC4-TTLL3A0A0A6YYG9 625 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 FGF17O60258 216 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ZNF432O94892 652 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ZFPL1O95159 310 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 WDPCPO95876 746 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TIMP1P01033 207 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 CSF1P09603 554 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 GABRA1P14867 456 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DCTDP32321 178 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 IGFALSP35858 605 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 PSMB10P40306 273 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 MNX1P50219 401 aaPredicted RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 NDUFAF6Q330K2 333 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 STAC2Q6ZMT1 411 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TMUB2Q71RG4 321 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DGLUCYQ7Z3D6 616 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 FAM220AQ7Z4H9 259 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 GLB1L2Q8IW92 636 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DND1Q8IYX4 353 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 ESX1Q8N693 406 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TOE1Q96GM8 510 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 PTCHD1Q96NR3 888 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 OR2M4Q96R27 311 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 LMF2Q9BU23 707 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 SRMSQ9H3Y6 488 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TCF7L1Q9HCS4 588 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 DPP7Q9UHL4 492 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ZNF337Q9Y3M9 751 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TRBV5-5A0A0J9YX44 114 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 A0A1B0GW55 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SYNDIG1LA6NDD5 238 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 H7C417 338 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TSPAN4O14817 238 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 FKTNO75072 461 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 IGF2P01344 180 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4L2P0CJ85 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4L3P0CJ86 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4L4P0CJ87 422 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4L5P0CJ88 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4L6P0CJ89 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4L7P0CJ90 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 NAT1P18440 290 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 IL32P24001 234 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 RPL4P36578 427 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 EMDP50402 254 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SLC25A1P53007 311 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 NANOS3P60323 173 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 PRPS1P60891 318 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 GMFBP60983 142 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 RPS4XP62701 263 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 SNRPNP63162 240 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 ID2Q02363 134 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SSBP1Q04837 148 aaKnown RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 ENPP2Q13822 863 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 GSG1LQ6UXU4 331 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ZAR1Q86SH2 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SERPINA12Q8IW75 414 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 ZBTB44Q8NCP5 570 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 BVESQ8NE79 360 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 OR51L1Q8NGJ5 315 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 THRSPQ92748 146 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SMARCD2Q92925 531 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 RNF166Q96A37 237 aaPredicted RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 CAPNS2Q96L46 248 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 CXorf58Q96LI9 332 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 APOOQ9BUR5 198 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SLC19A3Q9BZV2 496 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TTYH1Q9H313 450 aaPredicted RBP8.01□□□□□ -1.13
TDP1-204ENST00000545686 DUX4Q9UBX2 424 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 MTFP1Q9UDX5 166 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 SERGEFQ9UGK8 458 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 PILRAQ9UKJ1 303 aa8.01□□□□□ -1.13
TDP1-204ENST00000545686 TBC1D3IA0A087WXS9 549 aa8□□□□□ -1.13
TDP1-204ENST00000545686 A0A1W2PP55 124 aa8□□□□□ -1.13
TDP1-204ENST00000545686 OR6C68A6NDL8 312 aa8□□□□□ -1.13
TDP1-204ENST00000545686 EFCAB7A8K855 629 aa8□□□□□ -1.13
TDP1-204ENST00000545686 HSPB2A8KAH6 182 aa8□□□□□ -1.13
TDP1-204ENST00000545686 A8MUA0 341 aa8□□□□□ -1.13
TDP1-204ENST00000545686 F5H5P2 479 aa8□□□□□ -1.13
TDP1-204ENST00000545686 CYR61O00622 381 aa8□□□□□ -1.13
TDP1-204ENST00000545686 XRCC3O43542 346 aa8□□□□□ -1.13
TDP1-204ENST00000545686 NARSO43776 548 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 CTSVO60911 334 aa8□□□□□ -1.13
TDP1-204ENST00000545686 ADAM11O75078 769 aa8□□□□□ -1.13
TDP1-204ENST00000545686 RPA2P15927 270 aa8□□□□□ -1.13
TDP1-204ENST00000545686 CTNNB1P35222 781 aa8□□□□□ -1.13
TDP1-204ENST00000545686 PSMD4P55036 377 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 ZNF273Q14593 569 aa8□□□□□ -1.13
TDP1-204ENST00000545686 UBXN2BQ14CS0 331 aa8□□□□□ -1.13
TDP1-204ENST00000545686 EXOSC7Q15024 291 aaKnown RBP8□□□□□ -1.13
TDP1-204ENST00000545686 ZNF141Q15928 474 aa8□□□□□ -1.13
TDP1-204ENST00000545686 HSPB2Q16082 182 aa8□□□□□ -1.13
TDP1-204ENST00000545686 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
TDP1-204ENST00000545686 FAM78AQ5JUQ0 283 aa8□□□□□ -1.13
TDP1-204ENST00000545686 MANEAQ5SRI9 462 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms