RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 IL32P24001 234 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TACR3P29371 465 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 LARS2Q15031 903 aaKnown RBP6.79□□□□□ -1.32
SNHG1-223ENST00000545440 RGNQ15493 299 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 Q6ZT83 130 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 GALNT5Q7Z7M9 940 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 CXorf67Q86X51 503 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-223ENST00000545440 VRK2Q86Y07 508 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 ADGRG3Q86Y34 549 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TGIF2LYQ8IUE0 185 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 FUNDC1Q8IVP5 155 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 DTX3Q8N9I9 347 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 BBS10Q8TAM1 723 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 CKAP2Q8WWK9 683 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 PIGTQ969N2 578 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 S100PBPQ96BU1 408 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 DDIT4LQ96D03 193 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 ARL5BQ96KC2 179 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF300Q96RE9 604 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-223ENST00000545440 PIP5K1AQ99755 562 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 OR11A1Q9GZK7 315 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 RABEP2Q9H5N1 569 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 ARMC7Q9H6L4 198 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 SLC52A3Q9NQ40 469 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 RLIMQ9NVW2 624 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 SLC25A37Q9NYZ2 338 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 CCDC167Q9P0B6 97 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM181Q9P2C4 612 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 OSGIN1Q9UJX0 560 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 CORO2BQ9UQ03 480 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 IFT52Q9Y366 437 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TMED7Q9Y3B3 224 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 ARFGEF3Q5TH69 2177 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TRBV5-3A0A0A0MS03 114 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 A0A1W2PP18 115 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM72A0PK05 275 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF716A6NP11 495 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF814B7Z6K7 855 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 GPR171O14626 319 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 EIF1BO60739 113 aaKnown RBP6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ETS2P15036 469 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ACAA2P42765 397 aaKnown RBP6.78□□□□□ -1.32
SNHG1-223ENST00000545440 RIPPLY3P57055 190 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 COPZ1P61923 177 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 SLC35A1P78382 337 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 H3F3AP84243 136 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ITGADQ13349 1161 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 GCNT6Q5T4J0 391 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 WBP2NLQ6ICG8 309 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 PAQR6Q6TCH4 344 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF704Q6ZNC4 412 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-223ENST00000545440 MSRB3Q8IXL7 192 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 LRRC75A-AS1Q8N1F1 130 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 MAL2Q969L2 176 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 APH1AQ96BI3 265 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 CCL19Q99731 98 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM204Q9BSN7 226 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF385DQ9H6B1 395 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 UBTD1Q9HAC8 227 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 NGBQ9NPG2 151 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 VAPAQ9P0L0 249 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 MALT1Q9UDY8 824 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 SLC9A8Q9Y2E8 581 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 CHST2Q9Y4C5 530 aa6.78□□□□□ -1.32
SNHG1-223ENST00000545440 YLPM1P49750 1951 aaKnown RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ALPK2Q86TB3 2170 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 C5orf58C9J3I9 102 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 EDF1O60869 148 aaKnown RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 TMCC2O75069 709 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 PGM3O95394 542 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ADAP00813 363 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 GPIP06744 558 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 GKN3PP0CG01 181 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 CD99P14209 185 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 GPX2P18283 190 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 EDNRAP25101 427 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 PRKAR1BP31321 381 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 IDUAP35475 653 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 OR2B6P58173 313 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ADAM8P78325 824 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 FOXD4Q12950 439 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 TAB1Q15750 504 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ACKR1Q16570 336 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 AGKQ53H12 422 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 PAGE3Q5JUK9 113 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 SHEQ5VZ18 495 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 FBXW9Q5XUX1 488 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 REEP3Q6NUK4 255 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 C6orf89Q6UWU4 347 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 BHLHA15Q7RTS1 189 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 SERPINA11Q86U17 422 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 P2RY8Q86VZ1 359 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 KRTAP1-3Q8IUG1 177 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF100Q8IYN0 542 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 CADM2Q8N3J6 435 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 BHLHE22Q8NFJ8 381 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-223ENST00000545440 TSPEARQ8WU66 669 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 HSD17B8Q92506 261 aa6.77□□□□□ -1.33
SNHG1-223ENST00000545440 FOXRED1Q96CU9 486 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms