RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 MGAT4BQ9UQ53 548 aa20.46■□□□□ 0.87
CHFR-222ENST00000544093 AMDHD2Q9Y303 409 aa20.46■□□□□ 0.87
CHFR-222ENST00000544093 SLC25A15Q9Y619 301 aa20.46■□□□□ 0.87
CHFR-222ENST00000544093 DPRXA6NFQ7 191 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 ZNF587BE7ETH6 402 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 FOSL1P15407 271 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 PRSS57Q6UWY2 283 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 ANKK1Q8NFD2 765 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 OR6T1Q8NGN1 323 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 PROX1Q92786 737 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 ASPNQ9BXN1 380 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 LINC00470Q9BZP3 86 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 PCDHAC1Q9H158 963 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 OBP2BQ9NPH6 170 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 CADP27708 2225 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 MTORP42345 2549 aa20.45■□□□□ 0.86
CHFR-222ENST00000544093 M0R082 166 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 MT-ATP6P00846 226 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 PAX1P15863 534 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 CD247P20963 164 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 PTAFRP25105 342 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 GRPRP30550 384 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 C1DQ13901 141 aaKnown RBP20.44■□□□□ 0.86
CHFR-222ENST00000544093 ZNF672Q499Z4 452 aaPredicted RBP20.44■□□□□ 0.86
CHFR-222ENST00000544093 ENTPD8Q5MY95 495 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 NIPAL3Q6P499 406 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 KLHL24Q6TFL4 600 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 OR52N5Q8NH56 324 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 ZNF417Q8TAU3 575 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 IGFBPL1Q8WX77 278 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 SLC41A3Q96GZ6 507 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 MPP4Q96JB8 637 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 ZNF587Q96SQ5 575 aaPredicted RBP20.44■□□□□ 0.86
CHFR-222ENST00000544093 WFDC6Q9BQY6 131 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 GSX2Q9BZM3 304 aa20.44■□□□□ 0.86
CHFR-222ENST00000544093 WNT11O96014 354 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 NQO1P15559 274 aaKnown RBP20.43■□□□□ 0.86
CHFR-222ENST00000544093 SELENOPP49908 381 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 SH3BGRP55822 239 aaPredicted RBP20.43■□□□□ 0.86
CHFR-222ENST00000544093 FOXD4Q12950 439 aaPredicted RBP20.43■□□□□ 0.86
CHFR-222ENST00000544093 LINC00114Q6XXX2 140 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 ADAMTS16Q8TE57 1224 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 ZNF583Q96ND8 569 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 SLC19A3Q9BZV2 496 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 MOV10Q9HCE1 1003 aaKnown RBP20.43■□□□□ 0.86
CHFR-222ENST00000544093 SLC17A5Q9NRA2 495 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 FAIMQ9NVQ4 179 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 NPAP1Q9NZP6 1156 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 ARMCX1Q9P291 453 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 B3GAT1Q9P2W7 334 aa20.43■□□□□ 0.86
CHFR-222ENST00000544093 TRAPPC13A5PLN9 417 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 FAM220BPB1ANY3 271 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 ABCD4O14678 606 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 PRPS1P60891 318 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 NPTX1Q15818 432 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 LSRQ86X29 649 aaPredicted RBP20.42■□□□□ 0.86
CHFR-222ENST00000544093 DEPDC4Q8N2C3 294 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 WFDC11Q8NEX6 87 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 OR2T12Q8NG77 320 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 VANGL1Q8TAA9 524 aaPredicted RBP20.42■□□□□ 0.86
CHFR-222ENST00000544093 RCN3Q96D15 328 aa20.42■□□□□ 0.86
CHFR-222ENST00000544093 POLR2J2Q9GZM3 115 aaKnown RBP20.42■□□□□ 0.86
CHFR-222ENST00000544093 POLR2J3Q9H1A7 115 aaKnown RBP20.42■□□□□ 0.86
CHFR-222ENST00000544093 MRPL39Q9NYK5 338 aaKnown RBP20.42■□□□□ 0.86
CHFR-222ENST00000544093 CPSF4LA6NMK7 179 aaKnown RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 SLC43A1O75387 559 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 BGLAPP02818 100 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 CRYBA2P53672 197 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 FOXG1P55316 489 aaPredicted RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 CLDN17P56750 224 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 RPS4XP62701 263 aaKnown RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 IL1RL1Q01638 556 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 Q5PR19 223 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 C9orf135Q5VTT2 229 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 HMBOX1Q6NT76 420 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 TTC33Q6PID6 262 aaPredicted RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 SPATA21Q7Z572 469 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 UEVLDQ8IX04 471 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 KDM8Q8N371 416 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 C10orf53Q8N6V4 93 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 KBTBD8Q8NFY9 601 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 LILRB1Q8NHL6 650 aaPredicted RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 SMAP2Q8WU79 429 aaPredicted RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 NSRP1Q9H0G5 558 aaKnown RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 ZNF701Q9NV72 531 aaPredicted RBP20.41■□□□□ 0.86
CHFR-222ENST00000544093 ACANP16112 2415 aa20.41■□□□□ 0.86
CHFR-222ENST00000544093 NDUFAB1O14561 156 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 ZNF432O94892 652 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 CD40P25942 277 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 PTH2RP49190 550 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 ZNF83P51522 516 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 PUDPQ08623 228 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 PMS2P3Q13401 168 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 KRTAP1-3Q8IUG1 177 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 WDR31Q8NA23 367 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 PIK3C3Q8NEB9 887 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 PERPQ96FX8 193 aa20.4■□□□□ 0.86
CHFR-222ENST00000544093 ALKBH3Q96Q83 286 aaPredicted RBP20.4■□□□□ 0.86
CHFR-222ENST00000544093 HOPXQ9BPY8 73 aaPredicted RBP20.4■□□□□ 0.86
CHFR-222ENST00000544093 EFCAB1Q9HAE3 211 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms