RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 PRAMEF2O60811 474 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 NTN1O95631 604 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 HNRNPA2B1P22626 353 aaKnown RBP11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 MAGEB1P43366 347 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 KIR2DL3P43628 341 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 POU3F1Q03052 451 aaPredicted RBP11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 PDE7AQ13946 482 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 GPR18Q14330 331 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 MELKQ14680 651 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 ARHGAP19Q14CB8 494 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 GPR157Q5UAW9 335 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 IDO2Q6ZQW0 420 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 BATF2Q8N1L9 274 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 AVL9Q8NBF6 648 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 MR1Q95460 341 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 C1QTNF3Q9BXJ4 246 aa11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 CGGBP1Q9UFW8 167 aaPredicted RBP11.96□□□□□ -0.5
TUBGCP2-210ENST00000543663 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■■■ 27
TUBGCP2-210ENST00000543663 ARF1P84077 181 aaKnown RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 GK2Q14410 553 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ESX1Q8N693 406 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 AMER3Q8N944 861 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 NECAB3Q96P71 396 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SCGB3A2Q96PL1 93 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 CA14Q9ULX7 337 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 A0A0B4J2A0 478 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 LRIT2A6NDA9 550 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 VSTM2BA6NLU5 285 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 KCNJ13O60928 360 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 AK1P00568 194 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 EGFP01133 1207 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 DYRK1AQ13627 763 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF77Q15935 545 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 OR10K2Q6IF99 312 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 MBOAT2Q6ZWT7 520 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 RHOUQ7L0Q8 258 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SFXN5Q8TD22 340 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 UCN3Q969E3 161 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 OR5B2Q96R09 309 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 OR2M2Q96R28 347 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SFXN1Q9H9B4 322 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ACOXLQ9NUZ1 547 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SHPKQ9UHJ6 478 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 HIF3AQ9Y2N7 669 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 MED12Q93074 2177 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 NPIPA2E9PIF3 369 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 NPIPA3F8WFD2 350 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 G3V3Y1 287 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 LINC01565O15544 149 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 IL33O95760 270 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 KLK3P07288 261 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 UBL4AP11441 157 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 FBLP22087 321 aaKnown RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 AGTR1P30556 359 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 RIN1Q13671 783 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 KIAA0040Q15053 153 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 HEPHL1Q6MZM0 1159 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF704Q6ZNC4 412 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 RFPL4BQ6ZWI9 263 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 GKN2Q86XP6 184 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 OR5H2Q8NGV7 314 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 OR52I2Q8NH67 350 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ELP5Q8TE02 316 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ADAMTS14Q8WXS8 1223 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SFXN2Q96NB2 322 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SPACA5Q96QH8 159 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 RNF215Q9Y6U7 377 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 MGAMO43451 1857 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 GAAP10253 952 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 MAOAP21397 527 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 NFYAP23511 347 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SRYQ05066 204 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ELOCQ15369 112 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 LAS2Q8IYD9 372 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 RELL2Q8NC24 303 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF417Q8TAU3 575 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 SELENOIQ9C0D9 397 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF436Q9C0F3 470 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 HOXD1Q9GZZ0 328 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 APMAPQ9HDC9 416 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 KLHL21Q9UJP4 597 aa11.95□□□□□ -0.5
TUBGCP2-210ENST00000543663 CXorf51AA0A1B0GTR3 108 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 TXNL1O43396 289 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 PRR35P0CG20 571 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 AKAIN1P0CW23 69 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 GABRR1P24046 479 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 PRPS1P60891 318 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 AGERQ15109 404 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF281Q9Y2X9 895 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF638Q14966 1978 aaKnown RBP11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 TRDV1A0A1B0GX56 115 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 UPK1AO00322 258 aa11.94□□□□□ -0.5
TUBGCP2-210ENST00000543663 ZNF593O00488 134 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms