RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 NUDCD2Q8WVJ2 157 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 TNFAIP8L1Q8WVP5 186 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 MAL2Q969L2 176 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 DTD2Q96FN9 168 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF582Q96NG8 517 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 S100A13Q99584 98 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 ORAI3Q9BRQ5 295 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 URM1Q9BTM9 101 aaKnown RBP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 SLITRK2Q9H156 845 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 TMEM134Q9H6X4 195 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 LPAR2Q9HBW0 351 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 DNAJC4Q9NNZ3 241 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 UBQLN4Q9NRR5 601 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 SERINC1Q9NRX5 453 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 ASB6Q9NWX5 421 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 SEMA5BQ9P283 1151 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 LNP1A1A4G5 178 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM72CH0Y354 149 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 H3BN98 237 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 NDUFS8O00217 210 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MAGEB4O15481 346 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 GCM2O75603 506 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ABLIM3O94929 683 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 VNN2O95498 520 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FGBP02675 491 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CD5P06127 495 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 OSMP13725 252 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CCR1P32246 355 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CD80P33681 288 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SULT1A1P50225 295 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ACSM1Q08AH1 577 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 PTPRNQ16849 979 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 NKPD1Q17RQ9 610 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 AKR1C8PQ5T2L2 129 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM72AQ5TYM5 149 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM72DQ6L9T8 149 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CXorf57Q6NSI4 855 aaKnown RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MED27Q6P2C8 311 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SLC39A5Q6ZMH5 540 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 HIST2H3AQ71DI3 136 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 GOLGA7Q7Z5G4 137 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM72BQ86X60 149 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 GLB1L2Q8IW92 636 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 BAP18Q8IXM2 172 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF610Q8N9Z0 462 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MRGPRDQ8TDS7 321 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 RNF141Q8WVD5 230 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MYEOVQ96EZ4 313 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF845Q96IR2 970 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAAP24Q9BTP7 215 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SELENOIQ9C0D9 397 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ADAM19Q9H013 955 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FGF20Q9NP95 211 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 THSD1Q9NS62 852 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 TVP23BQ9NYZ1 205 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 COX16Q9P0S2 106 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 LUZP4Q9P127 313 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF346Q9UL40 294 aaKnown RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CAMK2AQ9UQM7 478 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FBXO7Q9Y3I1 522 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SLC5A10A0PJK1 596 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CPED1A4D0V7 1026 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 M0R036 132 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CTDSPLO15194 276 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 HYAL3O43820 417 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 KLK8O60259 260 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 PIAS2O75928 621 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 C8GP07360 202 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 DLSTP36957 453 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 THPOP40225 353 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CASRP41180 1078 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MAPK9P45984 424 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SELENOWP63302 87 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 PITX1P78337 314 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ATXN7L3Q14CW9 347 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM199XQ6PEV8 388 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 NXPE4Q6UWF7 544 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 UBE3DQ7Z6J8 389 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 TAF8Q7Z7C8 310 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 LHFPL4Q7Z7J7 247 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF573Q86YE8 665 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM185AQ8N0U4 392 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FAM26EQ8N5C1 309 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 OR13C8Q8NGS7 320 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 OR52I2Q8NH67 350 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 TMED6Q8WW62 240 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 LINC01599Q8WXQ3 324 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 NTNG2Q96CW9 530 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CDKN2AIPNLQ96HQ2 116 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 HSPA12BQ96MM6 686 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 YPEL4Q96NS1 127 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 FCRL4Q96PJ5 515 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 OR2M4Q96R27 311 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SMOQ99835 787 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 SULT4A1Q9BR01 284 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms