RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ADPRHP54922 357 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ARF5P84085 180 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OR2F1Q13607 317 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OR10K2Q6IF99 312 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SPNS3Q6ZMD2 512 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ABHD13Q7L211 337 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 CEACAM19Q7Z692 300 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 RNF175Q8N4F7 328 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SUSD6Q92537 303 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 LRIG1Q96JA1 1093 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 PDFQ9HBH1 243 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 MRPS30Q9NP92 439 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM138Q9NPI0 162 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 MIEF1Q9NQG6 463 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SIRT7Q9NRC8 400 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM184BQ9Y519 407 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OARD1Q9Y530 152 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 DOCK8Q8NF50 2099 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ANKRD61A6NGH8 418 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 GABARAPH6UMI1 98 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 SULT2B1O00204 365 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 CD160O95971 181 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 TRBC1P01850 177 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 EPHX1P07099 455 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 H1F0P07305 194 aaKnown RBP8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 TYRP1P17643 537 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 EPORP19235 508 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 C5AR1P21730 350 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 TBXA2RP21731 343 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 DCTDP32321 178 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 AHRP35869 848 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 CDH11P55287 796 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 PJVKQ0ZLH3 352 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF345Q14585 488 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 TMPRSS11BQ86T26 416 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 DEFB123Q8N688 67 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 SDR9C7Q8NEX9 313 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 OR10D4PQ8NGN7 298 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 XAGE5Q8WWM1 108 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 LMLNQ96KR4 655 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 GUCD1Q96NT3 240 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 F2RL3Q96RI0 385 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 SEMA3CQ99985 751 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 GPR61Q9BZJ8 451 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 UBE2ZQ9H832 354 aaPredicted RBP8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM27Q9HBJ8 222 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 C19orf12Q9NSK7 152 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 OBP2AQ9NY56 170 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 KLHL9Q9P2J3 617 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 ZDHHC8Q9ULC8 765 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 KCNIP3Q9Y2W7 256 aa8.71□□□□□ -1.01
CTNNA1-243ENST00000540387 ANKRD20A5PA0PJZ0 165 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 NARSO43776 548 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 SH3BGRLO75368 114 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 NME6O75414 186 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 REM1O75628 298 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 RLN1P04808 185 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 SFTA3P0C7M3 94 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 ADH7P40394 386 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 MAGEB1P43366 347 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 PCBP3P57721 371 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 RPE65Q16518 533 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 CPTPQ5TA50 214 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 NSUN5P2Q63ZY6 315 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 TCTN3Q6NUS6 607 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 CMTM4Q8IZR5 234 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 PRSS35Q8N3Z0 413 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 TEX26Q8N6G2 289 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 NUBPLQ8TB37 319 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC7A13Q8TCU3 470 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 SMAD5Q99717 465 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 PLA2G12AQ9BZM1 189 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 P2RY12Q9H244 342 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 ABRACLQ9P1F3 81 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC35A3Q9Y2D2 325 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 NPFFR2Q9Y5X5 522 aa8.71□□□□□ -1.02
CTNNA1-243ENST00000540387 RNF222A6NCQ9 220 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 K7ERQ8 282 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 IGHA1P01876 353 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 ASGR2P07307 311 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC2A1P11166 492 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 ADH5P11766 374 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 FOSL2P15408 326 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 MMP11P24347 488 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 MAT2AP31153 395 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 TTPAP49638 278 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 CACNG1Q06432 222 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 MESP2Q0VG99 397 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 NDUFA9Q16795 377 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 NDUFAF6Q330K2 333 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 GLT8D1Q68CQ7 371 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 ARL9Q6T311 187 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 IL34Q6ZMJ4 242 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 SYT9Q86SS6 491 aa8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 BRIX1Q8TDN6 353 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-243ENST00000540387 APOBEC4Q8WW27 367 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms