RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PRSS3P35030 304 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC5A12Q1EHB4 618 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 HNRNPA1L2Q32P51 320 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RNLSQ5VYX0 342 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 LRFN4Q6PJG9 635 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 COX15Q7KZN9 410 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RDH10Q8IZV5 341 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 JAGN1Q8N5M9 183 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR56A3Q8NH54 315 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SCGB1C1Q8TD33 95 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 C16orf78Q8WTQ4 265 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF764Q96H86 408 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 BOCQ9BWV1 1114 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 LTB4R2Q9NPC1 389 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 USP36Q9P275 1121 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 USP22Q9UPT9 525 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 POLR1DQ9Y2S0 133 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 KCNE1BA0A087WTH5 132 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TCRBV5S2A0A599 114 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 MEIS3P1A6NDR6 274 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 IQCF5A8MTL0 148 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 LOC730098B7Z3J9 87 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TSPAN6O43657 245 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PTP4A3O75365 173 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 F3P13726 295 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RAB5AP20339 215 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PIGAP37287 484 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RFC3P40938 356 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 MANFP55145 182 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR10A3P58181 314 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 DOC2AQ14183 400 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 IQCJQ1A5X6 159 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF791Q3KP31 576 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 GPR157Q5UAW9 335 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PRPF38BQ5VTL8 546 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ADAMTSL4Q6UY14 1074 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 MCEMP1Q8IX19 187 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 NPAS3Q8IXF0 933 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR6K2Q8NGY2 324 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR5AK3PQ8NH89 298 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SUN3Q8TAQ9 357 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 DUSP19Q8WTR2 217 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SORCS1Q8WY21 1168 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 NUS1Q96E22 293 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OPALINQ96PE5 141 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 MAP3K3Q99759 626 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CNTNAP3Q9BZ76 1288 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR11A1Q9GZK7 315 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SRRQ9GZT4 340 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SYNPO2LQ9H987 977 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PATZ1Q9HBE1 687 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ELOVL2Q9NXB9 296 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RCE1Q9Y256 329 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PLXNA2O75051 1894 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TET1Q8NFU7 2136 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC5A10A0PJK1 596 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC33A1O00400 549 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 LEFTY1O75610 366 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PRSS23O95084 383 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR2C1O95371 312 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CISD3P0C7P0 127 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ARSAP15289 507 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CCINQ13939 588 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 GUK1Q16774 197 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PCGF3Q3KNV8 242 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM240Q5SV17 173 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OPN5Q6U736 354 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 APOOLQ6UXV4 268 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 DLEU7Q6UYE1 221 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PPP1R3BQ86XI6 285 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF440Q8IYI8 595 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RGL4Q8IZJ4 473 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR8J2Q8NGG1 315 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR5W2Q8NH69 310 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 NFKBIDQ8NI38 313 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 INTS12Q96CB8 462 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TMPRSS13Q9BYE2 586 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CHRNA9Q9UGM1 479 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 M0R143 59 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 XKRYO14609 159 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 MOSPD3O75425 235 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ABHD16AO95870 558 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ADH1BP00325 375 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR13C7P0DN81 318 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CNR2P34972 360 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PCGF2P35227 344 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 STK19P49842 368 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC35A2P78381 396 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 KIAA0040Q15053 153 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 AGERQ15109 404 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC9A3R2Q15599 337 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PLBD1Q6P4A8 553 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TNFAIP8L2Q6P589 184 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CHRDL2Q6WN34 429 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 RNF111Q6ZNA4 994 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 FAM26EQ8N5C1 309 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC5A8Q8N695 610 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR2T33Q8NG76 320 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR5D16Q8NGK9 328 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 LKAAEAR1Q8TD35 194 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms