RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FBXL3Q9UKT7 428 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 A0A0B4J2E0 115 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 A0A1B0GX12 115 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 NAP1L6A6NFF2 107 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR8G3PP0DMU2 310 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 CPMP14384 443 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ACHEP22303 614 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 MST1P26927 711 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SLC6A6P31641 620 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ACTA2P62736 377 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ACTG2P63267 376 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 FAM53BQ14153 422 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 GK2Q14410 553 aaPredicted RBP12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ALG10BQ5I7T1 473 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 STAC2Q6ZMT1 411 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SLC36A1Q7Z2H8 476 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SYS1Q8N2H4 156 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR4N2Q8NGD1 307 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR5T3Q8NGG3 340 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SLC25A28Q96A46 364 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 GPN1Q9HCN4 374 aaPredicted RBP12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 AKAP7Q9P0M2 348 aaPredicted RBP12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF749O43361 778 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SDC3O75056 442 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 IFNGP01579 166 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 PPP3CBP16298 524 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 EPCAMP16422 314 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 C4BPBP20851 252 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 RPL4P36578 427 aaKnown RBP12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 EFNB2P52799 333 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 POU4F2Q12837 409 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 ARHGAP11AQ6P4F7 1023 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 GLB1L2Q8IW92 636 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR10AC1Q8NH08 325 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 OR8S1Q8NH09 359 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 SLC2A12Q8TD20 617 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 TMPRSS13Q9BYE2 586 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 TMEM27Q9HBJ8 222 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 KLHDC2Q9Y2U9 406 aa12.75□□□□□ -0.37
SCNN1A-215ENST00000540037 FGF17O60258 216 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ITGB8P26012 769 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 DEFA5Q01523 94 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 PON3Q15166 354 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF425Q6IV72 752 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 TMPRSS12Q86WS5 348 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ETFBKMTQ8IXQ9 262 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 OR51A4Q8NGJ6 313 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 HAVCR1Q96D42 359 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 DEFB118Q96PH6 123 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 TMEM138Q9NPI0 162 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 RABL2AQ9UBK7 228 aaPredicted RBP12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ZNF281Q9Y2X9 895 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 TRAV8-7A0A075B6U6 113 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ART1P52961 327 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ERVK-25P63136 954 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 FHL5Q5TD97 284 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 PDZD9Q8IXQ8 264 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 TEX101Q9BY14 249 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 ULBP3Q9BZM4 244 aa12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 FBXO9Q9UK97 447 aaPredicted RBP12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
SCNN1A-215ENST00000540037 CACNA1IQ9P0X4 2223 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 ACOT7O00154 380 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 AGR2O95994 175 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 SPI1P17947 270 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 IL10RAQ13651 578 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 C11orf88Q6PI97 169 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 DGAT2L6Q6ZPD8 337 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 BIVMQ86UB2 503 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 PAQR7Q86WK9 346 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 NPEPL1Q8NDH3 523 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 OR2AK2Q8NG84 335 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 OR51S1Q8NGJ8 323 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 SLC38A3Q99624 504 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 GAL3ST1Q99999 423 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 PRDM9Q9NQV7 894 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 MED9Q9NWA0 146 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 SERTAD3Q9UJW9 196 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 C19orf53Q9UNZ5 99 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 HEATR5AQ86XA9 2040 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 D6RAR5 112 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 F5H5P2 479 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 CTSVO60911 334 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 FBXO45P0C2W1 286 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 CMPK1P30085 196 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 ACAA2P42765 397 aaKnown RBP12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 DLX5P56178 289 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 STK11Q15831 433 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 GAB4Q2WGN9 574 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 FBXO42Q6P3S6 717 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
SCNN1A-215ENST00000540037 CDH26Q8IXH8 852 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms