RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TTC33Q6PID6 262 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 NHLRC1Q6VVB1 395 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 CBLL1Q75N03 491 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 MPP4Q96JB8 637 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 OXGR1Q96P68 337 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 AMBRA1Q9C0C7 1298 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 MEPEQ9NQ76 525 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 ASB6Q9NWX5 421 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 ADA2Q9NZK5 511 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 RIMS3Q9UJD0 308 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 AKAP6Q13023 2319 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 KPNA4O00629 521 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 NDUFAB1O14561 156 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 RAD51DO75771 328 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 OR5F1O95221 314 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 ZNF682O95780 498 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 SERPINA1P01009 418 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 CLDN17P56750 224 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 TAS2R41P59536 307 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 FOXD4Q12950 439 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 GKAP1Q5VSY0 366 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 C9orf135Q5VTT2 229 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 WDFY1Q8IWB7 410 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 PGAM4Q8N0Y7 254 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 C10orf53Q8N6V4 93 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 RBM15BQ8NDT2 890 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 ADPRHL1Q8NDY3 354 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 TMEM255BQ8WV15 326 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 HSD17B8Q92506 261 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 SLCO5A1Q9H2Y9 848 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 A4GNTQ9UNA3 340 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 CORINQ9Y5Q5 1042 aa16.11■□□□□ 0.17
SNRPA1-203ENST00000540017 ANKRD17O75179 2603 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 LOC102725191A0A1B0GVB3 256 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 J3KTA2 159 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 PLPP3O14495 311 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 TRAF3IP2O43734 574 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 ZNF432O94892 652 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 CH25HO95992 272 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 ZNF43P17038 809 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 MSX2P35548 267 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 YAP1P46937 504 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 UGT2B15P54855 530 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 PMS2P3Q13401 168 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 KRT72Q14CN4 511 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 MFSD13AQ14CX5 517 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 STK11Q15831 433 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 ZNF74Q16587 644 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 NIPAL3Q6P499 406 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 LINGO2Q7L985 606 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 TSEN54Q7Z6J9 526 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 LRRC17Q8N6Y2 441 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 SCAIQ8N9R8 606 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 CCDC197Q8NCU1 140 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 LZICQ8WZA0 190 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 PLPPR2Q96GM1 343 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 HSH2DQ96JZ2 352 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 CDRT15Q96T59 188 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 ASPNQ9BXN1 380 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 POLR2J2Q9GZM3 115 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 POLR2J3Q9H1A7 115 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 MRPL39Q9NYK5 338 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 TAS2R16Q9NYV7 291 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 UPB1Q9UBR1 384 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 CD300AQ9UGN4 299 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 ST6GALNAC2Q9UJ37 374 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 ITGB1BP2Q9UKP3 347 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 PLEKHA6Q9Y2H5 1048 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 CREBBPQ92793 2442 aa16.1■□□□□ 0.17
SNRPA1-203ENST00000540017 FFAR1O14842 300 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 UPK3AO75631 287 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 PLAUP00749 431 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 MT-ATP6P00846 226 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 NQO1P15559 274 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 TCN1P20061 433 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 IL1RL1Q01638 556 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 GABRA6Q16445 453 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 BEX5Q5H9J7 111 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 GLYATQ6IB77 296 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 SLC46A3Q7Z3Q1 461 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 FAM86B1Q8N7N1 296 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 PFN4Q8NHR9 129 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 FAM162AQ96A26 154 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 SLC19A3Q9BZV2 496 aa16.09■□□□□ 0.17
SNRPA1-203ENST00000540017 A0A1W2PR80 420 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 CIB4A0PJX0 185 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 OR5H1A6NKK0 313 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 HSD17B1P14061 328 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 IST1P53990 364 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 C1DQ13901 141 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 PPA1Q15181 289 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 FXNQ16595 210 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 IFI44LQ53G44 452 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 TIMM23BQ5SRD1 257 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 DEFB107AQ8IZN7 70 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 POMGNT2Q8NAT1 580 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 OR5J2Q8NH18 312 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 GEMIN6Q8WXD5 167 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms