RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HTR4Q13639 388 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 ZNF141Q15928 474 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 LINC00303Q3SY05 128 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 PRRT3Q5FWE3 981 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 MANEAQ5SRI9 462 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 PXDC1Q5TGL8 231 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 FBXO46Q6PJ61 603 aaPredicted RBP8.85□□□□□ -0.99
CDH13-204ENST00000539548 KIRREL2Q6UWL6 708 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 STAC2Q6ZMT1 411 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 CHMP1BQ7LBR1 199 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 PRSS41Q7RTY9 318 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 CA13Q8N1Q1 262 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 FAM131CQ96AQ9 280 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 ELMOD3Q96FG2 381 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 ZFYVE21Q9BQ24 234 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 LMF2Q9BU23 707 aaKnown RBP8.85□□□□□ -0.99
CDH13-204ENST00000539548 PPA2Q9H2U2 334 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 CA10Q9NS85 328 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 CXXC1Q9P0U4 656 aaPredicted RBP8.85□□□□□ -0.99
CDH13-204ENST00000539548 ZNF69Q9UC07 566 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 ING1Q9UK53 422 aaPredicted RBP8.85□□□□□ -0.99
CDH13-204ENST00000539548 PCDHGA5Q9Y5G8 931 aa8.85□□□□□ -0.99
CDH13-204ENST00000539548 TP53BP1Q12888 1972 aaPredicted RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 EML5Q05BV3 1969 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 C2orf16Q68DN1 1984 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 TRBV23OR9-2A0A075B6M9 112 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 MFSD2BA6NFX1 497 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 IGKV1D-16P01601 117 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 HOXD4P09016 255 aaPredicted RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 TACSTD2P09758 323 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 SLC35E2P0CK97 266 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 ANXA7P20073 488 aaKnown RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 S1PR1P21453 382 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 ZP3P21754 424 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 FCARP24071 287 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 CDK2P24941 298 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 CALCRP30988 508 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 PTGS2P35354 604 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 CLDN12P56749 244 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 KIAA1024LP59773 190 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 PSG6Q00889 435 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 LINC01590Q5TEZ4 76 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 STPG1Q5TH74 334 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 TANGO2Q6ICL3 276 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 RGS7BPQ6MZT1 257 aaPredicted RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 ZC3H14Q6PJT7 736 aaKnown RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 DND1Q8IYX4 353 aaKnown RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 OR52R1Q8NGF1 315 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 OR5T3Q8NGG3 340 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 OR1E3Q8WZA6 343 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 RERGQ96A58 199 aaPredicted RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 RBM18Q96H35 190 aaKnown RBP8.84□□□□□ -0.99
CDH13-204ENST00000539548 LMAN2LQ9H0V9 348 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 SLITRK2Q9H156 845 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 CD93Q9NPY3 652 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 SDHAF2Q9NX18 166 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 ACTR10Q9NZ32 417 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 ZNF337Q9Y3M9 751 aa8.84□□□□□ -0.99
CDH13-204ENST00000539548 A0A087WUJ7 227 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TBC1D3IA0A087WXS9 549 aa8.83□□□□□ -1
CDH13-204ENST00000539548 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 EFCAB7A8K855 629 aa8.83□□□□□ -1
CDH13-204ENST00000539548 HMSDA8MTL9 139 aa8.83□□□□□ -1
CDH13-204ENST00000539548 NPIPB9F8W1W9 429 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SLC31A1O15431 190 aa8.83□□□□□ -1
CDH13-204ENST00000539548 CTNSO60931 367 aa8.83□□□□□ -1
CDH13-204ENST00000539548 B3GALNT1O75752 331 aa8.83□□□□□ -1
CDH13-204ENST00000539548 GLSO94925 669 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 HIST1H2ABP04908 130 aa8.83□□□□□ -1
CDH13-204ENST00000539548 DCTDP32321 178 aa8.83□□□□□ -1
CDH13-204ENST00000539548 MAGEB1P43366 347 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TAS2R20P59543 309 aa8.83□□□□□ -1
CDH13-204ENST00000539548 CBFBQ13951 182 aa8.83□□□□□ -1
CDH13-204ENST00000539548 HLXQ14774 488 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 ZNHIT3Q15649 155 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 Q499Y3 187 aa8.83□□□□□ -1
CDH13-204ENST00000539548 B3GNTL1Q67FW5 361 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 ENPP7Q6UWV6 458 aa8.83□□□□□ -1
CDH13-204ENST00000539548 DGAT2L6Q6ZPD8 337 aa8.83□□□□□ -1
CDH13-204ENST00000539548 HIST3H2AQ7L7L0 130 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SLC36A1Q7Z2H8 476 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 DNAAF1Q8NEP3 725 aa8.83□□□□□ -1
CDH13-204ENST00000539548 OR6K6Q8NGW6 343 aa8.83□□□□□ -1
CDH13-204ENST00000539548 LHFPL5Q8TAF8 219 aa8.83□□□□□ -1
CDH13-204ENST00000539548 ZPLD1Q8TCW7 415 aa8.83□□□□□ -1
CDH13-204ENST00000539548 HIST1H2ACQ93077 130 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TCF7L1Q9HCS4 588 aa8.83□□□□□ -1
CDH13-204ENST00000539548 RXFP3Q9NSD7 469 aa8.83□□□□□ -1
CDH13-204ENST00000539548 PRELID1Q9Y255 219 aa8.83□□□□□ -1
CDH13-204ENST00000539548 KCNMB2Q9Y691 235 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TBC1D3DA0A087WVF3 549 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TRBV5-5A0A0J9YX44 114 aa8.83□□□□□ -1
CDH13-204ENST00000539548 OR6C74A6NCV1 312 aa8.83□□□□□ -1
CDH13-204ENST00000539548 POM121BA6NF01 834 aa8.83□□□□□ -1
CDH13-204ENST00000539548 PRR32B1ATL7 298 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TBC1D3LB9A6J9 549 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TRIM77I1YAP6 450 aa8.83□□□□□ -1
CDH13-204ENST00000539548 IMPA2O14732 288 aa8.83□□□□□ -1
CDH13-204ENST00000539548 GNB5O14775 395 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms