RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SLC25A52Q3SY17 297 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 TMEM255AQ5JRV8 349 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 BEND3Q5T5X7 828 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 NANOGP8Q6NSW7 305 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 AFTPHQ6ULP2 937 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 TMEM183AQ8IXX5 376 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 FADS6Q8N9I5 356 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 OR4F15Q8NGB8 312 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 OR1N2Q8NGR9 330 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 MAIP1Q8WWC4 291 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 SRMSQ9H3Y6 488 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 TM9SF3Q9HD45 589 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 SIGLEC8Q9NYZ4 499 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 IL36GQ9NZH8 169 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 ACTR3BQ9P1U1 418 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 SEC14L3Q9UDX4 400 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 TMCO1Q9UM00 188 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 RBMY1BA6NDE4 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 RBMY1EA6NEQ0 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 F5H6K3 240 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 LOC110117498-PIK3R3F6TDL0 507 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 TAPBPO15533 448 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 NEBLO76041 1014 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 CTDNEP1O95476 244 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 RBMY1DP0C7P1 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 RBMY1A1P0DJD3 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 CCDC130P13994 396 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 TNFRSF17Q02223 184 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 ENPEPQ07075 957 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 KLRC3Q07444 240 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 GGTA1PQ4G0N0 100 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 COA6Q5JTJ3 125 aaKnown RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 OR52E8Q6IFG1 317 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF573Q86YE8 665 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 OR10T2Q8NGX3 314 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 FAM3CQ92520 227 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 CMTM7Q96FZ5 175 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 C4orf36Q96KX1 117 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 BMFQ96LC9 184 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 NPAS2Q99743 824 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 OMDQ99983 421 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 TMEM246Q9BRR3 403 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 NDFIP1Q9BT67 221 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 RAB34Q9BZG1 259 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 REEP4Q9H6H4 257 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 RANBP3Q9H6Z4 567 aaPredicted RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 MEAF6Q9HAF1 191 aa2.16□□□□□ -2.06
CCDC7-209ENST00000539197 FARSBQ9NSD9 589 aaKnown RBP2.16□□□□□ -2.06
CCDC7-209ENST00000539197 PIKFYVEQ9Y2I7 2098 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 SLC31A2O15432 143 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 RGS16O15492 202 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-209ENST00000539197 B4GALT2O60909 372 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 BCAS1O75363 584 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-209ENST00000539197 AP2A1O95782 977 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 OPN1MWP04001 364 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 RHOXF2BP0C7M4 288 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 OPN1MW2P0DN77 364 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 OPN1MW3P0DN78 364 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 PNMTP11086 282 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 GCAP28676 217 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 IL1RL1Q01638 556 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 SNTB2Q13425 540 aaKnown RBP2.15□□□□□ -2.07
CCDC7-209ENST00000539197 HSP90AA5PQ58FG0 334 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 LY6G6FQ5SQ64 297 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 C19orf35Q6ZS72 473 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 PGAP1Q75T13 922 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 OR2L13Q8N349 312 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 SYT14Q8NB59 555 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 CTNNBL1Q8WYA6 563 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-209ENST00000539197 TM4SF19Q96DZ7 209 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 ITCHQ96J02 903 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 MRPL45Q9BRJ2 306 aaKnown RBP2.15□□□□□ -2.07
CCDC7-209ENST00000539197 RNF167Q9H6Y7 350 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 ELOVL3Q9HB03 270 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 RPH3ALQ9UNE2 315 aa2.15□□□□□ -2.07
CCDC7-209ENST00000539197 DOCK9Q9BZ29 2069 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 KDRP35968 1356 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 CCDC182A6NF36 153 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 PEX7O00628 323 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 POLR2DO15514 142 aaKnown RBP2.14□□□□□ -2.07
CCDC7-209ENST00000539197 HSMCR30P0CW71 290 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 IL12AP29459 219 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 MAP3K8P41279 467 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 P2RY1P47900 373 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 SLC15A2Q16348 729 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 CDC37Q16543 378 aaPredicted RBP2.14□□□□□ -2.07
CCDC7-209ENST00000539197 Q6ZR03 302 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 H2AFVQ71UI9 128 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 CCDC80Q76M96 950 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 NLRP9Q7RTR0 991 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 ZNF546Q86UE3 836 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 FNDC5Q8NAU1 212 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 SYNPRQ8TBG9 265 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 EFHD2Q96C19 240 aaPredicted RBP2.14□□□□□ -2.07
CCDC7-209ENST00000539197 AMDHD1Q96NU7 426 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 OSBPL11Q9BXB4 747 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 DEFB127Q9H1M4 99 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 POLE3Q9NRF9 147 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 THUMPD1Q9NXG2 353 aaKnown RBP2.14□□□□□ -2.07
CCDC7-209ENST00000539197 HOXC10Q9NYD6 342 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms