RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 OR14L1PQ8NHC6 308 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 DNAJA4Q8WW22 397 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 LRTOMTQ8WZ04 291 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 ROBO4Q8WZ75 1007 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 SLC41A3Q96GZ6 507 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 C7orf34Q96L11 122 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 WFDC6Q9BQY6 131 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 PRR14Q9BWN1 585 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 SEMA6AQ9H2E6 1030 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 DNAJB9Q9UBS3 223 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 FBXL2Q9UKC9 423 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 CDC42EP3Q9UKI2 254 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 TMCC3Q9ULS5 477 aa11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 SAMHD1Q9Y3Z3 626 aaKnown RBP11.12□□□□□ -0.63
CLSTN3-208ENST00000538933 FREM1Q5H8C1 2179 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 MALRD1Q5VYJ5 2156 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 A0A087WZY1 265 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 A0A1B0GWA3 101 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 GPRIN2O60269 458 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 TGM6O95932 706 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 CXCR1P25024 350 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 HTR2AP28223 471 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 PLAURQ03405 335 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 MERTKQ12866 999 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 ATP6AP1Q15904 470 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 ETFDHQ16134 617 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 RAET1LQ5VY80 246 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 ULK3Q6PHR2 472 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 GRINAQ7Z429 371 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 AMIGO2Q86SJ2 522 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 YRDCQ86U90 279 aaKnown RBP11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 OFCC1Q8IZS5 231 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 PQLC1Q8N2U9 271 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 LSMEM1Q8N8F7 131 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 FADS6Q8N9I5 356 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 OR52J3Q8NH60 311 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 GPR119Q8TDV5 335 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 ZBTB8AQ96BR9 441 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 C1GALT1C1Q96EU7 318 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 KRCC1Q9NPI7 259 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 MED17Q9NVC6 651 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 RIMS3Q9UJD0 308 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 PRDM4Q9UKN5 801 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 SLC7A7Q9UM01 511 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 A4GNTQ9UNA3 340 aa11.11□□□□□ -0.63
CLSTN3-208ENST00000538933 A0A096LNT2 108 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 H3BNX3 289 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 FAAHO00519 579 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 HS3ST1O14792 307 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 CHP2O43745 196 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 CGAP01215 116 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 THRBP10828 461 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 PNMTP11086 282 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 ANPEPP15144 967 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 ZNF23P17027 643 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 CCNA2P20248 432 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 TACR3P29371 465 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 SRD5A2P31213 254 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 IDUAP35475 653 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 SLC1A3P43003 542 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 POLR2HP52434 150 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 FOXF1Q12946 379 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 TOMM34Q15785 309 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 C6orf52Q5T4I8 152 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 VWA1Q6PCB0 445 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 TTC33Q6PID6 262 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 BTLAQ7Z6A9 289 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 SLC38A4Q969I6 547 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 CENPNQ96H22 339 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 ZC3HAV1LQ96H79 300 aaKnown RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 PKP2Q99959 881 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 PLA2G12AQ9BZM1 189 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 NMNAT1Q9HAN9 279 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 ACER3Q9NUN7 267 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 ELOVL5Q9NYP7 299 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 SPIN1Q9Y657 262 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 U3KQV3 271 aa11.1□□□□□ -0.63
CLSTN3-208ENST00000538933 A0A0B4J2E0 115 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 A0A1B0GX12 115 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 C16orf97H3BN30 126 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 MGRN1O60291 552 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 ADAM11O75078 769 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 ATP6V1G2O95670 118 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 CRHP06850 196 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 PRKCAP17252 672 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 CHMP24386 653 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 ACVR1BP36896 505 aa11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 KIR2DL2P43627 348 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-208ENST00000538933 RIPK1Q13546 671 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms