RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MAIP1Q8WWC4 291 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 SRMSQ9H3Y6 488 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 TM9SF3Q9HD45 589 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 SIGLEC8Q9NYZ4 499 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 IL36GQ9NZH8 169 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 ACTR3BQ9P1U1 418 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 SEC14L3Q9UDX4 400 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 TMCO1Q9UM00 188 aa2.17□□□□□ -2.06
CCDC7-208ENST00000537047 RBMY1BA6NDE4 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 RBMY1EA6NEQ0 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 F5H6K3 240 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 LOC110117498-PIK3R3F6TDL0 507 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 TAPBPO15533 448 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 NEBLO76041 1014 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 CTDNEP1O95476 244 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 RBMY1DP0C7P1 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 RBMY1A1P0DJD3 496 aaKnown RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 CCDC130P13994 396 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 TNFRSF17Q02223 184 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 ENPEPQ07075 957 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 KLRC3Q07444 240 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 GGTA1PQ4G0N0 100 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 COA6Q5JTJ3 125 aaKnown RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 OR52E8Q6IFG1 317 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 ZNF573Q86YE8 665 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 OR10T2Q8NGX3 314 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 FAM3CQ92520 227 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 FRZBQ92765 325 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 RMI2Q96E14 147 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 CMTM7Q96FZ5 175 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 C4orf36Q96KX1 117 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 BMFQ96LC9 184 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 NPAS2Q99743 824 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 OMDQ99983 421 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 TMEM246Q9BRR3 403 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 NDFIP1Q9BT67 221 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 RAB34Q9BZG1 259 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 REEP4Q9H6H4 257 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 RANBP3Q9H6Z4 567 aaPredicted RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 MEAF6Q9HAF1 191 aa2.16□□□□□ -2.06
CCDC7-208ENST00000537047 FARSBQ9NSD9 589 aaKnown RBP2.16□□□□□ -2.06
CCDC7-208ENST00000537047 PIKFYVEQ9Y2I7 2098 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 SLC31A2O15432 143 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 RGS16O15492 202 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-208ENST00000537047 B4GALT2O60909 372 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 BCAS1O75363 584 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-208ENST00000537047 AP2A1O95782 977 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 OPN1MWP04001 364 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 RHOXF2BP0C7M4 288 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 OPN1MW2P0DN77 364 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 OPN1MW3P0DN78 364 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 GCAP28676 217 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 IL1RL1Q01638 556 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 SNTB2Q13425 540 aaKnown RBP2.15□□□□□ -2.07
CCDC7-208ENST00000537047 HSP90AA5PQ58FG0 334 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 LY6G6FQ5SQ64 297 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 C19orf35Q6ZS72 473 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 PGAP1Q75T13 922 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 OR2L13Q8N349 312 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 ARRDC1Q8N5I2 433 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 SYT14Q8NB59 555 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 UBALD1Q8TB05 177 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 CTNNBL1Q8WYA6 563 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-208ENST00000537047 TM4SF19Q96DZ7 209 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 ITCHQ96J02 903 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 MRPL45Q9BRJ2 306 aaKnown RBP2.15□□□□□ -2.07
CCDC7-208ENST00000537047 RNF167Q9H6Y7 350 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 ELOVL3Q9HB03 270 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 RPH3ALQ9UNE2 315 aa2.15□□□□□ -2.07
CCDC7-208ENST00000537047 DOCK9Q9BZ29 2069 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 KDRP35968 1356 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 CCDC182A6NF36 153 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 PEX7O00628 323 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 POLR2DO15514 142 aaKnown RBP2.14□□□□□ -2.07
CCDC7-208ENST00000537047 HSMCR30P0CW71 290 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 IL12AP29459 219 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 MAP3K8P41279 467 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 P2RY1P47900 373 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 SLC15A2Q16348 729 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 Q6ZR03 302 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 H2AFVQ71UI9 128 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 CCDC80Q76M96 950 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 NLRP9Q7RTR0 991 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 ZNF546Q86UE3 836 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 FNDC5Q8NAU1 212 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 SYNPRQ8TBG9 265 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 EFHD2Q96C19 240 aaPredicted RBP2.14□□□□□ -2.07
CCDC7-208ENST00000537047 AMDHD1Q96NU7 426 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 DEFB127Q9H1M4 99 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 POLE3Q9NRF9 147 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 THUMPD1Q9NXG2 353 aaKnown RBP2.14□□□□□ -2.07
CCDC7-208ENST00000537047 HOXC10Q9NYD6 342 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 AURKCQ9UQB9 309 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 YTHDF2Q9Y5A9 579 aaKnown RBP2.14□□□□□ -2.07
CCDC7-208ENST00000537047 BRWD3Q6RI45 1802 aa2.14□□□□□ -2.07
CCDC7-208ENST00000537047 GPRASP1Q5JY77 1395 aa2.13□□□□□ -2.07
CCDC7-208ENST00000537047 PRSS37A4D1T9 235 aa2.13□□□□□ -2.07
CCDC7-208ENST00000537047 LRP5LA4QPB2 252 aa2.13□□□□□ -2.07
CCDC7-208ENST00000537047 A8MXQ7 604 aa2.13□□□□□ -2.07
CCDC7-208ENST00000537047 C12orf77C9JDV5 145 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms