RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MOKQ9UQ07 419 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 CR1P17927 2039 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 ARPC4-TTLL3A0A0A6YYG9 625 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 A8MV72 311 aaPredicted RBP11.46□□□□□ -0.57
RTN3-207ENST00000536011 VSTM5A8MXK1 200 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 EVPLLA8MZ36 301 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 FTCDNL1E5RQL4 147 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 NR5A2O00482 541 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 SLC43A1O75387 559 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 LGI1O95970 557 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 ARAFP10398 606 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 RPS5P46782 204 aaKnown RBP11.46□□□□□ -0.57
RTN3-207ENST00000536011 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
RTN3-207ENST00000536011 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.57
RTN3-207ENST00000536011 LRIF1Q5T3J3 769 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 FAM69AQ5T7M9 428 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 AGBL2Q5U5Z8 902 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 FAM91A1Q658Y4 838 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 REEP3Q6NUK4 255 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 ANKRD16Q6P6B7 361 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 PODNL1Q6PEZ8 512 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 BLOC1S3Q6QNY0 202 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 NET1Q7Z628 596 aaPredicted RBP11.46□□□□□ -0.57
RTN3-207ENST00000536011 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 ZNF525Q8N782 197 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 LSMEM1Q8N8F7 131 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 PROX1Q92786 737 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 SPDL1Q96EA4 605 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 TNFRSF13CQ96RJ3 184 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 ZNF607Q96SK3 696 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 EVA1AQ9H8M9 152 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 TESQ9UGI8 421 aaKnown RBP11.46□□□□□ -0.57
RTN3-207ENST00000536011 CDC42EP3Q9UKI2 254 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 CHST2Q9Y4C5 530 aa11.46□□□□□ -0.57
RTN3-207ENST00000536011 HEATR1Q9H583 2144 aaKnown RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 ANK3Q12955 4377 aaKnown RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 TRAV36DV7A0A075B6V5 113 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 IGHV1-18A0A0C4DH31 117 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 NDUFS8O00217 210 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 SERPINB7O75635 380 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 PDE5AO76074 875 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 F12P00748 615 aaPredicted RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 SLC6A2P23975 617 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 CLDN17P56750 224 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 VLDLRP98155 873 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 CDK6Q00534 326 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 IL1RL1Q01638 556 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 CHRFAM7AQ494W8 412 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 ALG10BQ5I7T1 473 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 ULK3Q6PHR2 472 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 DHRS4L2Q6PKH6 230 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 SLC46A3Q7Z3Q1 461 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 CCDC36Q8IYA8 594 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 ADPRHL1Q8NDY3 354 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 OR4F15Q8NGB8 312 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 NFKBIDQ8NI38 313 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 DYDC1Q8WWB3 177 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 BCL2L2Q92843 193 aaPredicted RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 FBXO17Q96EF6 278 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 KTI12Q96EK9 354 aaPredicted RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 SLC47A1Q96FL8 570 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 OXGR1Q96P68 337 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 EPYCQ99645 322 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 PTDSS2Q9BVG9 487 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 RABEP2Q9H5N1 569 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 MYOZ1Q9NP98 299 aaPredicted RBP11.45□□□□□ -0.58
RTN3-207ENST00000536011 CCDC167Q9P0B6 97 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 ADAM21Q9UKJ8 722 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 CORINQ9Y5Q5 1042 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 GMEB1Q9Y692 573 aa11.45□□□□□ -0.58
RTN3-207ENST00000536011 LOC102725191A0A1B0GVB3 256 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 A0A1B0GWA3 101 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 FZD7O75084 574 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 ERCC1P07992 297 aaPredicted RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 VIMP08670 466 aaKnown RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 NQO1P15559 274 aaKnown RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 HOXB9P17482 250 aaPredicted RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 SERPINF1P36955 418 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 IDH3AP50213 366 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 PDLIM4P50479 330 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 ATP4BP51164 291 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 RGS8P57771 180 aaPredicted RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 HOXC5Q00444 222 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 EGR4Q05215 589 aa11.44□□□□□ -0.58
RTN3-207ENST00000536011 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 H1FNTQ75WM6 255 aaPredicted RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 CXXC5Q7LFL8 322 aaKnown RBP11.44□□□□□ -0.58
RTN3-207ENST00000536011 RANBP3LQ86VV4 465 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms