RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CEP112Q8N8E3 955 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 CCDC71LQ8N9Z2 235 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 CATSPER1Q8NEC5 780 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 FAM81AQ8TBF8 368 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 MAGEE2Q8TD90 523 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 ZNF707Q96C28 371 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 IL4I1Q96RQ9 567 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 RHOXF2Q9BQY4 288 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 NIPSNAP3BQ9BS92 247 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 TM2D1Q9BX74 207 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 ANKRD60Q9BZ19 345 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 IQCGQ9H095 443 aaKnown RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 GLIPR2Q9H4G4 154 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 ANKRD19PQ9H560 264 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 PTGES2Q9H7Z7 377 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 KLHL28Q9NXS3 571 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 PDP1Q9P0J1 537 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 SLC7A8Q9UHI5 535 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 CFAP45Q9UL16 551 aa2.4□□□□□ -2.03
VBP1-203ENST00000535916 PACSIN2Q9UNF0 486 aaPredicted RBP2.4□□□□□ -2.03
VBP1-203ENST00000535916 TRBV11-1A0A0K0K1C0 115 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 A0A1W2PPV9 198 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 C9JVG2 144 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 G3V4G9 280 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 KIF2AO00139 706 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 POLR2DO15514 142 aaKnown RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 RS1O15537 224 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 RAMP3O60896 148 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 OR2F2O95006 317 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 CLDN9O95484 217 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 FTH1P02794 183 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 S100A9P06702 114 aaKnown RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 CT62P0C5K7 136 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 ATP1B2P14415 290 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 IMPDH1P20839 514 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 TUBG1P23258 451 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 NMT1P30419 496 aaKnown RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 BMI1P35226 326 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 ACVR1BP36896 505 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 RPS5P46782 204 aaKnown RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 GYG1P46976 350 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 CRYBB1P53674 252 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 CARD18P57730 90 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 RGS8P57771 180 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 RGS1Q08116 209 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 RAB40BQ12829 278 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 MERTKQ12866 999 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 DPYSL3Q14195 570 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 GPR157Q5UAW9 335 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 UFSP1Q6NVU6 142 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 FAHD2BQ6P2I3 314 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 TSEN54Q7Z6J9 526 aaKnown RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 PQLC3Q8N755 202 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 C15orf54Q8N8G6 183 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 DRAXINQ8NBI3 349 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 OR7G2Q8NG99 324 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 OR5L2Q8NGL0 311 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 OR1L6Q8NGR2 347 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 OR8K3Q8NH51 312 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 FAM110BQ8TC76 370 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 ACMSDQ8TDX5 336 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 GLYATL2Q8WU03 294 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 TADA1Q96BN2 335 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 EFHD2Q96C19 240 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 C19orf60Q96EN9 201 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 FAHD2AQ96GK7 314 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 CENPKQ9BS16 269 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 ZNF670Q9BS34 389 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 NICN1Q9BSH3 213 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 CNPY3Q9BT09 278 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 TRIM62Q9BVG3 475 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 SPATA16Q9BXB7 569 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 DUSP16Q9BY84 665 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 DNTTIP1Q9H147 329 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 STMN4Q9H169 189 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 VCXQ9H320 206 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 ZNF160Q9HCG1 818 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 TUBG2Q9NRH3 451 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 GCNT4Q9P109 453 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 WRAP73Q9P2S5 460 aaPredicted RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 VANGL2Q9ULK5 521 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 PRPF19Q9UMS4 504 aaKnown RBP2.39□□□□□ -2.03
VBP1-203ENST00000535916 COMMD3-BMI1R4GMX3 469 aa2.39□□□□□ -2.03
VBP1-203ENST00000535916 IGHV2-70DA0A0C4DH43 119 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 TRBV7-9A0A0J9YWB2 115 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 OR6C65A6NJZ3 312 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 USP27XA6NNY8 438 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 GABRR3A8MPY1 467 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 SUPT3HB4E1H0 165 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 C11orf98E9PRG8 122 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 GOLGA8TH3BQL2 631 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 DLGAP1O14490 977 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 N4BP1O75113 896 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 ZNF254O75437 659 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 LRATO95237 230 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 LGI1O95970 557 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 IVLP07476 585 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 TPM1P09493 284 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 MCF2P10911 925 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 CCNB1P14635 433 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms