RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SLC7A13Q8TCU3 470 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 CANT1Q8WVQ1 401 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 SH3GL3Q99963 347 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 FUZQ9BT04 418 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 SF3B5Q9BWJ5 86 aaKnown RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 ASPNQ9BXN1 380 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 OPN3Q9H1Y3 402 aaPredicted RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 C12orf49Q9H741 205 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 FKRPQ9H9S5 495 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 PLSCR4Q9NRQ2 329 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 MRPL39Q9NYK5 338 aaKnown RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 EMC3Q9P0I2 261 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 C6orf203Q9P0P8 240 aaPredicted RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 RASD1Q9Y272 281 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 B3GALT5Q9Y2C3 310 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 CORINQ9Y5Q5 1042 aa10.72□□□□□ -0.69
CHD4-203ENST00000535717 KLF2Q9Y5W3 355 aaPredicted RBP10.72□□□□□ -0.69
CHD4-203ENST00000535717 A8MXE2 369 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ANKRD65E5RJM6 399 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 MS4A18H0YCH9 400 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 PLPP3O14495 311 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 GPR171O14626 319 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 MSTNO14793 375 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 OR7A10O76100 309 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 VAMP5O95183 116 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 HPRP00739 348 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 RAP2AP10114 183 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 CD8BP10966 210 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 UMPSP11172 480 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
CHD4-203ENST00000535717 RRM2P31350 389 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 NTF4P34130 210 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ASCL1P50553 236 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 SMIM11AP58511 58 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 PRKCDQ05655 676 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 PMS2P3Q13401 168 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 SEC23BQ15437 767 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 MS4A18Q3C1V0 323 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 C1orf146Q5VVC0 180 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ZNF730Q6ZMV8 503 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 MBOAT2Q6ZWT7 520 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 GALNT5Q7Z7M9 940 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 LUZP2Q86TE4 346 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 MEX3DQ86XN8 651 aaKnown RBP10.71□□□□□ -0.69
CHD4-203ENST00000535717 NRMQ8IXM6 262 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 RNF113BQ8IZP6 322 aaKnown RBP10.71□□□□□ -0.69
CHD4-203ENST00000535717 ZIC4Q8N9L1 334 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ZNF610Q8N9Z0 462 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ADPRHL1Q8NDY3 354 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 OR9K2Q8NGE7 335 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 OR5J2Q8NH18 312 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 BPIFA2Q96DR5 249 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 SGTBQ96EQ0 304 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 CHID1Q9BWS9 393 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
CHD4-203ENST00000535717 NANSQ9NR45 359 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ASH1LQ9NR48 2969 aaKnown RBP10.71□□□□□ -0.69
CHD4-203ENST00000535717 B3GAT1Q9P2W7 334 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 ZNF229Q9UJW7 825 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 PROCRQ9UNN8 238 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 AURKCQ9UQB9 309 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 FLVCR1Q9Y5Y0 555 aa10.71□□□□□ -0.69
CHD4-203ENST00000535717 CRYBG3Q68DQ2 2970 aa10.71□□□□□ -0.7
CHD4-203ENST00000535717 LOC102725191A0A1B0GVB3 256 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 HTR3EA5X5Y0 456 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 C19orf84I3L1E1 186 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 CIB2O75838 187 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 GADD45GO95257 159 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 IFI30P13284 250 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 NQO1P15559 274 aaKnown RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 FUT1P19526 365 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 MAKP20794 623 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 EDNRAP25101 427 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 CCNIQ14094 377 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 POU4F3Q15319 338 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 FBXL19-AS1Q494R0 122 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 ZNF474Q6S9Z5 364 aaPredicted RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 CREB3L2Q70SY1 520 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 EPHX4Q8IUS5 362 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 LIPHQ8WWY8 451 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 SLCO4A1Q96BD0 722 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 RSRC1Q96IZ7 334 aaKnown RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 FAM210AQ96ND0 272 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 OXGR1Q96P68 337 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 ZNF385AQ96PM9 386 aaKnown RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 TAS2R5Q9NYW4 299 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 NOSIPQ9Y314 301 aaKnown RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 HCFC1P51610 2035 aa10.7□□□□□ -0.7
CHD4-203ENST00000535717 FLNBO75369 2602 aaKnown RBP10.7□□□□□ -0.7
CHD4-203ENST00000535717 FREM1Q5H8C1 2179 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 SH3PXD2BA1X283 911 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 PRSS44E7EML9 344 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 KRT36O76013 467 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 HIST1H2ABP04908 130 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 ADORA3P0DMS8 318 aa10.69□□□□□ -0.7
CHD4-203ENST00000535717 HLA-DOBP13765 273 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms