RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 C3orf36Q3SXR2 165 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 GPAT3Q53EU6 434 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 TMEM225Q6GV28 225 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 ZNF418Q8TF45 676 aaPredicted RBP13.69□□□□□ -0.22
RPS3-220ENST00000534555 FAM216AQ8WUB2 273 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 TMEM186Q96B77 213 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 C7orf26Q96N11 449 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 ZNF446Q9NWS9 450 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 FBXO9Q9UK97 447 aaPredicted RBP13.69□□□□□ -0.22
RPS3-220ENST00000534555 SPEF1Q9Y4P9 236 aa13.69□□□□□ -0.22
RPS3-220ENST00000534555 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 ZNF503-AS2A6NEH8 195 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 OR6C65A6NJZ3 312 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 VSTM5A8MXK1 200 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 SDHDO14521 159 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 CPSF4O95639 269 aaKnown RBP13.68□□□□□ -0.22
RPS3-220ENST00000534555 GPIP06744 558 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 CBR1P16152 277 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 P2RY4P51582 365 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 CLDN8P56748 225 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 BNIP2Q12982 314 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 MSMPQ1L6U9 139 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 ELFN2Q5R3F8 820 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 KRT80Q6KB66 452 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 OGFOD2Q6N063 350 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 CREB3L2Q70SY1 520 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 ANKRD46Q86W74 232 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 MAGEE2Q8TD90 523 aaPredicted RBP13.68□□□□□ -0.22
RPS3-220ENST00000534555 OIT3Q8WWZ8 545 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 LRRC37BQ96QE4 947 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 ADPRHL2Q9NX46 363 aa13.68□□□□□ -0.22
RPS3-220ENST00000534555 TMEM229AB2RXF0 380 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 TRIM77I1YAP6 450 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 AGR2O95994 175 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 MSMBP08118 114 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 TCN1P20061 433 aaPredicted RBP13.67□□□□□ -0.22
RPS3-220ENST00000534555 PAX7P23759 505 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 EPHA3P29320 983 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 HILS1P60008 231 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 ROR2Q01974 943 aaKnown RBP13.67□□□□□ -0.22
RPS3-220ENST00000534555 EPS8Q12929 822 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 NPRL3Q12980 569 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 SHQ1Q6PI26 577 aaKnown RBP13.67□□□□□ -0.22
RPS3-220ENST00000534555 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
RPS3-220ENST00000534555 EPHX4Q8IUS5 362 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 ANKFN1Q8N957 763 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 ANKRD27Q96NW4 1050 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 DPY30Q9C005 99 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 PIF1Q9H611 641 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 WDR55Q9H6Y2 383 aaPredicted RBP13.67□□□□□ -0.22
RPS3-220ENST00000534555 TREM2Q9NZC2 230 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 GRIP1Q9Y3R0 1128 aa13.67□□□□□ -0.22
RPS3-220ENST00000534555 MEGF8Q7Z7M0 2845 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 RNASET2O00584 256 aaKnown RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 AVPP01185 164 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 HPXP02790 462 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 UQCRC2P22695 453 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 GPR6P46095 362 aaPredicted RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 KHKP50053 298 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 ARF1P84077 181 aaKnown RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 SNTB2Q13425 540 aaKnown RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 DAG1Q14118 895 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 SYPL1Q16563 259 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 SAXO2Q658L1 398 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 NXNQ6DKJ4 435 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 FAHD2BQ6P2I3 314 aaPredicted RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 KDM8Q8N371 416 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 FAM169BQ8N8A8 192 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 ZNF837Q96EG3 531 aaPredicted RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 FAHD2AQ96GK7 314 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 MRPL37Q9BZE1 423 aaKnown RBP13.66□□□□□ -0.22
RPS3-220ENST00000534555 SLC38A1Q9H2H9 487 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 CRLF2Q9HC73 371 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 USH1CQ9Y6N9 552 aa13.66□□□□□ -0.22
RPS3-220ENST00000534555 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 HMGN4O00479 90 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 TGDSO95455 350 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 CHRM4P08173 479 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 GKN3PP0CG01 181 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 GAAP10253 952 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 SAGP10523 405 aaPredicted RBP13.65□□□□□ -0.22
RPS3-220ENST00000534555 EPHA1P21709 976 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 CXCR1P25024 350 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 MAP2K6P52564 334 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 ARFIP2P53365 341 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 SEC24CP53992 1094 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
RPS3-220ENST00000534555 AWAT1Q58HT5 328 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
RPS3-220ENST00000534555 MDP1Q86V88 176 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 MAELQ96JY0 434 aaKnown RBP13.65□□□□□ -0.22
RPS3-220ENST00000534555 MAGEB18Q96M61 343 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 ZNF317Q96PQ6 595 aaPredicted RBP13.65□□□□□ -0.22
RPS3-220ENST00000534555 RBM4Q9BWF3 364 aaKnown RBP13.65□□□□□ -0.22
RPS3-220ENST00000534555 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
RPS3-220ENST00000534555 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms