RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 GZMMP51124 257 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 ZNF83P51522 516 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 CDH11P55287 796 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 ATP5J2P56134 94 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-215ENST00000534307 CYP51A1Q16850 503 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 KDM8Q8N371 416 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 GPR32P1Q8NGA4 272 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 SLC25A36Q96CQ1 311 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 ARHGDIGQ99819 225 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-215ENST00000534307 TMEM120AQ9BXJ8 343 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 EVA1AQ9H8M9 152 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
SF3B2-215ENST00000534307 RPS6KB2Q9UBS0 482 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 MGAT4BQ9UQ53 548 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 AMDHD2Q9Y303 409 aa12.31□□□□□ -0.44
SF3B2-215ENST00000534307 TRAV36DV7A0A075B6V5 113 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 A0A087WUJ7 227 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 LOC102725191A0A1B0GVB3 256 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 OR6C65A6NJZ3 312 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 E7EQL1 145 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 M0R082 166 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 FXYD1O00168 92 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 OR2T1O43869 369 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 FMO6PO60774 539 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 LGI1O95970 557 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 CRYBA2P53672 197 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 NFYCQ13952 458 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 NPTX1Q15818 432 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 NRF1Q16656 503 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 DUSP7Q16829 419 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 SWT1Q5T5J6 900 aaKnown RBP12.3□□□□□ -0.44
SF3B2-215ENST00000534307 C11orf71Q6IPW1 123 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 KLHL17Q6TDP4 642 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 B3GLCTQ6Y288 498 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 ADPRHL1Q8NDY3 354 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 OR6S1Q8NH40 331 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 SLC47A1Q96FL8 570 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 SLC41A3Q96GZ6 507 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-215ENST00000534307 ZNF587Q96SQ5 575 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-215ENST00000534307 LINC00470Q9BZP3 86 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 FGFR1OP2Q9NVK5 253 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 ADAM21Q9UKJ8 722 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 B3GALT5Q9Y2C3 310 aa12.3□□□□□ -0.44
SF3B2-215ENST00000534307 M0QX08 132 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 M0R1B8 84 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 M0R3H8 397 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 AIM2O14862 343 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-215ENST00000534307 UPK3AO75631 287 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 OPN1SWP03999 348 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 C8BP07358 591 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 CD247P20963 164 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 GRPRP30550 384 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 PCGF2P35227 344 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 CDKN1AP38936 164 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 CDH12P55289 794 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 NCALDP61601 193 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 ETFDHQ16134 617 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 TRMT5Q32P41 509 aaKnown RBP12.29□□□□□ -0.44
SF3B2-215ENST00000534307 HIKESHIQ53FT3 197 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 NIPAL3Q6P499 406 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 NHLRC1Q6VVB1 395 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 LINC00114Q6XXX2 140 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 DNM1P46Q6ZS02 220 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 H1FNTQ75WM6 255 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-215ENST00000534307 ABHD12BQ7Z5M8 362 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-215ENST00000534307 RANBP3LQ86VV4 465 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-215ENST00000534307 SLC30A8Q8IWU4 369 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-215ENST00000534307 OR6T1Q8NGN1 323 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 OR1K1Q8NGR3 316 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 OXGR1Q96P68 337 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 TMEM43Q9BTV4 400 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 NELFAQ9H3P2 528 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 TMEM27Q9HBJ8 222 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 OBP2BQ9NPH6 170 aa12.29□□□□□ -0.44
SF3B2-215ENST00000534307 FAM171A2A8MVW0 826 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 ZNF587BE7ETH6 402 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 RPL36A-HNRNPH2H7BZ11 118 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 LYPD3O95274 346 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 IGHV4-39P01824 125 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 BGLAPP02818 100 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 THY1P04216 161 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 ZNF43P17038 809 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 GTF2E2P29084 291 aaKnown RBP12.28□□□□□ -0.44
SF3B2-215ENST00000534307 CLDN17P56750 224 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 PRPS1P60891 318 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 COQ5Q5HYK3 327 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 NANOGP8Q6NSW7 305 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 ZNF613Q6PF04 617 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 SLC22A25Q6T423 547 aa12.28□□□□□ -0.44
SF3B2-215ENST00000534307 TSPYL5Q86VY4 417 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms