RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 SELENOPP49908 381 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 TMEM249Q2WGJ8 235 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 TBRG1Q3YBR2 411 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 HIKESHIQ53FT3 197 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 AGKQ53H12 422 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 BLOC1S3Q6QNY0 202 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 EPHX4Q8IUS5 362 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 FUNDC1Q8IVP5 155 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 ZNF525Q8N782 197 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
GSDMD-213ENST00000533348 FAM168AQ92567 244 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 PROX1Q92786 737 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 SPDL1Q96EA4 605 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 LINC00470Q9BZP3 86 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 C12orf10Q9HB07 376 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 MOV10Q9HCE1 1003 aaKnown RBP13.18□□□□□ -0.3
GSDMD-213ENST00000533348 CCDC167Q9P0B6 97 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 MOKQ9UQ07 419 aa13.18□□□□□ -0.3
GSDMD-213ENST00000533348 ARPC4-TTLL3A0A0A6YYG9 625 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
GSDMD-213ENST00000533348 IFNA2P01563 188 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 NUDT7P0C024 238 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 ETS2P15036 469 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 HOXB9P17482 250 aaPredicted RBP13.17□□□□□ -0.3
GSDMD-213ENST00000533348 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
GSDMD-213ENST00000533348 VLDLRP98155 873 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 EGR4Q05215 589 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 MST1LQ2TV78 715 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 C6orf52Q5T4I8 152 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 HMBOX1Q6NT76 420 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 C6orf89Q6UWU4 347 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 HTRA1Q92743 480 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 BCL2L2Q92843 193 aaPredicted RBP13.17□□□□□ -0.3
GSDMD-213ENST00000533348 SLC38A2Q96QD8 506 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 PTDSS2Q9BVG9 487 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
GSDMD-213ENST00000533348 RCE1Q9Y256 329 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 MXRA5Q9NR99 2828 aa13.17□□□□□ -0.3
GSDMD-213ENST00000533348 DNHD1Q96M86 4753 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 IGHV1-18A0A0C4DH31 117 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 OR2T1O43869 369 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 LGI1O95970 557 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 PNMTP11086 282 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
GSDMD-213ENST00000533348 LGALS3BPQ08380 585 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 LRIF1Q5T3J3 769 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 ANKRD16Q6P6B7 361 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 SLC2A7Q6PXP3 512 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 LINGO2Q7L985 606 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 FAM169BQ8N8A8 192 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 LSMEM1Q8N8F7 131 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 MAL2Q969L2 176 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 SLC25A36Q96CQ1 311 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 OXGR1Q96P68 337 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 KCNS3Q9BQ31 491 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 NSRP1Q9H0G5 558 aaKnown RBP13.16□□□□□ -0.3
GSDMD-213ENST00000533348 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
GSDMD-213ENST00000533348 C5orf58C9J3I9 102 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 UPK3AO75631 287 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 ZNF432O94892 652 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 CRYAAP02489 173 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 ZNF43P17038 809 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 GTF2E2P29084 291 aaKnown RBP13.15□□□□□ -0.3
GSDMD-213ENST00000533348 PRKAR1BP31321 381 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 RPS5P46782 204 aaKnown RBP13.15□□□□□ -0.3
GSDMD-213ENST00000533348 HOXC5Q00444 222 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.36e-14■■■■□ 22.6
GSDMD-213ENST00000533348 NET1Q7Z628 596 aaPredicted RBP13.15□□□□□ -0.3
GSDMD-213ENST00000533348 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 NANOS1Q8WY41 292 aaKnown RBP13.15□□□□□ -0.3
GSDMD-213ENST00000533348 FBXO17Q96EF6 278 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 KTI12Q96EK9 354 aaPredicted RBP13.15□□□□□ -0.3
GSDMD-213ENST00000533348 ALKBH3Q96Q83 286 aaPredicted RBP13.15□□□□□ -0.3
GSDMD-213ENST00000533348 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
GSDMD-213ENST00000533348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■□□□□ 11.2
GSDMD-213ENST00000533348 LOC102725191A0A1B0GVB3 256 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 NDUFS8O00217 210 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 AIM2O14862 343 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 PDE5AO76074 875 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 IGLV1-44P01699 117 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 ARAFP10398 606 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 USF1P22415 310 aaPredicted RBP13.14□□□□□ -0.31
GSDMD-213ENST00000533348 PPIBP23284 216 aaKnown RBP13.14□□□□□ -0.31
GSDMD-213ENST00000533348 LSP1P33241 339 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 SERPINF1P36955 418 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 CLDN17P56750 224 aa13.14□□□□□ -0.31
GSDMD-213ENST00000533348 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms