RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 RAB33BQ9H082 229 aa13.97□□□□□ -0.17
CACNA1E-208ENST00000533229 CHRDQ9H2X0 955 aa13.97□□□□□ -0.17
CACNA1E-208ENST00000533229 THADAQ6YHU6 1953 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 NOTOA8MTQ0 251 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 CD14P08571 375 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 TACR3P29371 465 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 SLC6A1P30531 599 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 RORAP35398 523 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 CTXN1P60606 82 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 HNRNPKP61978 463 aaKnown RBP eCLIP13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 ZP2Q05996 745 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 TOMM34Q15785 309 aaPredicted RBP13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 ALG10Q5BKT4 473 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 ZNF684Q5T5D7 378 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 EXD3Q8N9H8 876 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 HSD17B8Q92506 261 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 NUDT9Q9BW91 350 aa13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 EXOSC3Q9NQT5 275 aaKnown RBP13.96□□□□□ -0.17
CACNA1E-208ENST00000533229 FRG2CA6NGY1 282 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 H7C1C5 153 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 AHCYP23526 432 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 UQCRC1P31930 480 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 BTCP35070 178 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 LCN6P62502 163 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 ZNF117Q03924 483 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 NDUFA5Q16718 116 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 SLC36A2Q495M3 483 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 CCDC58Q4VC31 144 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 SLITRK4Q8IW52 837 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 C9orf40Q8IXQ3 194 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 PRSS58Q8IYP2 241 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 LSM14AQ8ND56 463 aaKnown RBP13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 GFI1Q99684 422 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 ABCG5Q9H222 651 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 SRA1Q9HD15 236 aaKnown RBP13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 PAQR5Q9NXK6 330 aaPredicted RBP13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 ANKRD10Q9NXR5 420 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 KLHDC2Q9Y2U9 406 aa13.96□□□□□ -0.18
CACNA1E-208ENST00000533229 CACNA1IQ9P0X4 2223 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 IGHV1OR21-1A0A087WYE8 117 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 FLRT2O43155 660 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 CPNE3O75131 537 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 ARL6IP5O75915 188 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 ZFPL1O95159 310 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 IGF2P01344 180 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 FOLR1P15328 257 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 FOXL2P58012 376 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 RPL18Q07020 188 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 BIKQ13323 160 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 IL10RAQ13651 578 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 PLA1AQ53H76 456 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 UNQ9370/PRO34162Q6UXP9 181 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 NOXA1Q86UR1 476 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 YIPF7Q8N8F6 280 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 ZNF563Q8TA94 476 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 RGP1Q92546 391 aaPredicted RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 OR1F2PQ96R84 312 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 GFM1Q96RP9 751 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 CCNL2Q96S94 520 aaPredicted RBP13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 NOX4Q9NPH5 578 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 BRD7Q9NPI1 651 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 MMACHCQ9Y4U1 282 aa13.95□□□□□ -0.18
CACNA1E-208ENST00000533229 ACOD1A6NK06 481 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 SLC43A1O75387 559 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 PIAS2O75928 621 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 CD1AP06126 327 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 ARSBP15848 533 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 SDHAP31040 664 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 HSD11B2P80365 405 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 EBPQ15125 230 aaKnown RBP13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 Q5BKY6 102 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 MESTQ5EB52 335 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 C1QL3Q5VWW1 255 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 PYHIN1Q6K0P9 492 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 MARCH3Q86UD3 253 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 JAZF1Q86VZ6 243 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 RPS4Y2Q8TD47 263 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 DERL3Q96Q80 235 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 ADAM19Q9H013 955 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 GALNT9Q9HCQ5 603 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 TCRBV16S1A1N1A0A5B0 115 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 INMT-MINDY4F8WBC2 141 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 GATBO75879 557 aaKnown RBP13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 ADRB1P08588 477 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 CD3GP09693 182 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 SRMP19623 302 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 NR0B1P51843 470 aaKnown RBP13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 CDK10Q15131 360 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 HSD17B12Q53GQ0 312 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 POMZP3Q6PJE2 187 aa13.94□□□□□ -0.18
CACNA1E-208ENST00000533229 PRR23CQ6ZRP0 262 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms