RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 SVEP1Q4LDE5 3571 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 LOC105371242A0A075B767 164 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 ZNF503-AS2A6NEH8 195 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 CCDC154A6NI56 674 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 SYNGR3O43761 229 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 CDC14BO60729 498 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 VAMP5O95183 116 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
COPB1-209ENST00000533096 ZNF43P17038 809 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 CBLP22681 906 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 S100A3P33764 101 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 ARR3P36575 388 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 MAD2L1BPQ15013 274 aaPredicted RBP11.23□□□□□ -0.61
COPB1-209ENST00000533096 PDCD2Q16342 344 aaPredicted RBP11.23□□□□□ -0.61
COPB1-209ENST00000533096 CEACAM16Q2WEN9 425 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 ALKBH6Q3KRA9 238 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 C3orf36Q3SXR2 165 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 GKAP1Q5VSY0 366 aaPredicted RBP11.23□□□□□ -0.61
COPB1-209ENST00000533096 CARD17Q5XLA6 110 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 LRP11Q86VZ4 500 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 CMIPQ8IY22 773 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 PEX5LQ8IYB4 626 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 OR8J2Q8NGG1 315 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 OR52P1PQ8NH57 321 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 OIT3Q8WWZ8 545 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 RDH5Q92781 318 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
COPB1-209ENST00000533096 NELFAQ9H3P2 528 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 USP22Q9UPT9 525 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 RASD1Q9Y272 281 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 SPEF1Q9Y4P9 236 aa11.23□□□□□ -0.61
COPB1-209ENST00000533096 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
COPB1-209ENST00000533096 WDR91A4D1P6 747 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 M0R233 179 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 M0R3G1 203 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 SLC43A1O75387 559 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 AHSA1O95433 338 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 HLA-HP01893 362 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 DBIP07108 87 aaKnown RBP11.22□□□□□ -0.61
COPB1-209ENST00000533096 TFPTP0C1Z6 253 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 GAAP10253 952 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 SAGP10523 405 aaPredicted RBP11.22□□□□□ -0.61
COPB1-209ENST00000533096 NAT2P11245 290 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 PRG2P13727 222 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 EPHA1P21709 976 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 NR4A1P22736 598 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 GTF2E2P29084 291 aaKnown RBP11.22□□□□□ -0.61
COPB1-209ENST00000533096 RPS5P46782 204 aaKnown RBP11.22□□□□□ -0.61
COPB1-209ENST00000533096 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
COPB1-209ENST00000533096 P2RY4P51582 365 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 AQP5P55064 265 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 MVKQ03426 396 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 MSMPQ1L6U9 139 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 SPANXN4Q5MJ08 99 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 COX20Q5RI15 118 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 WBP2NLQ6ICG8 309 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 IL17RDQ8NFM7 739 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 OR51F2Q8NH61 342 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 APOPT1Q96IL0 206 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 RBM4Q9BWF3 364 aaKnown RBP11.22□□□□□ -0.61
COPB1-209ENST00000533096 LINC00470Q9BZP3 86 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 PIF1Q9H611 641 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 PCDHGB1Q9Y5G3 927 aa11.22□□□□□ -0.61
COPB1-209ENST00000533096 AVPP01185 164 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 ADRA2CP18825 462 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 ACAA2P42765 397 aaKnown RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 SH3BGRP55822 239 aaPredicted RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 TMEM33P57088 247 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 HOXC5Q00444 222 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 CASP8Q14790 479 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 GLIPR1L2Q4G1C9 344 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 AWAT1Q58HT5 328 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 AVPI1Q5T686 147 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 ZNF771Q7L3S4 317 aaPredicted RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 ZNF440Q8IYI8 595 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 CLIP4Q8N3C7 705 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 YIPF5Q969M3 257 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 MRPL24Q96A35 216 aaKnown RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 ZNF317Q96PQ6 595 aaPredicted RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 PANX1Q96RD7 426 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 MOV10Q9HCE1 1003 aaKnown RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 ZNF275Q9NSD4 429 aaPredicted RBP11.21□□□□□ -0.61
COPB1-209ENST00000533096 SEC14L4Q9UDX3 406 aa11.21□□□□□ -0.61
COPB1-209ENST00000533096 A0A1W2PPW3 197 aa11.2□□□□□ -0.62
COPB1-209ENST00000533096 FAAHO00519 579 aa11.2□□□□□ -0.62
COPB1-209ENST00000533096 ITM2AO43736 263 aa11.2□□□□□ -0.62
COPB1-209ENST00000533096 BCL10O95999 233 aa11.2□□□□□ -0.62
COPB1-209ENST00000533096 PNMTP11086 282 aa11.2□□□□□ -0.62
COPB1-209ENST00000533096 ACHEP22303 614 aa11.2□□□□□ -0.62
COPB1-209ENST00000533096 ANXA11P50995 505 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms