RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FUNDC1Q8IVP5 155 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 BCL2L2Q92843 193 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 FBXO17Q96EF6 278 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 THOC1Q96FV9 657 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 ZNF317Q96PQ6 595 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 PTDSS2Q9BVG9 487 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 LINC00470Q9BZP3 86 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 NPHS2Q9NP85 383 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC25A37Q9NYZ2 338 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLAMF8Q9P0V8 285 aa19.45■□□□□ 0.7
TRAPPC4-210ENST00000531290 IGHV1-18A0A0C4DH31 117 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 CRYAAP02489 173 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 ARAFP10398 606 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC25A16P16260 332 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 HOXB9P17482 250 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 ANKRD16Q6P6B7 361 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 C5orf46Q6UWT4 87 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 C6orf89Q6UWU4 347 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 ZNF525Q8N782 197 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 LSMEM1Q8N8F7 131 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 DNAJA4Q8WW22 397 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 FAM168AQ92567 244 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 OXGR1Q96P68 337 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC38A2Q96QD8 506 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 MOV10Q9HCE1 1003 aaKnown RBP19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 SELENONQ9NZV5 590 aa19.44■□□□□ 0.7
TRAPPC4-210ENST00000531290 A0A096LPE4 126 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 A0A1B0GWA3 101 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 A0A1W2PPZ6 126 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 A8MV72 311 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 AIM2O14862 343 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 GPRIN2O60269 458 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC43A1O75387 559 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 TROVE2P10155 538 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 HOXB1P14653 301 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 ATP4BP51164 291 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 SH3BGRP55822 239 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 IL1RL1Q01638 556 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 ROR2Q01974 943 aaKnown RBP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 SQLEQ14534 574 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 ALG10BQ5I7T1 473 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 PAGE3Q5JUK9 113 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 FAM69AQ5T7M9 428 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 DHRS4L2Q6PKH6 230 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 NET1Q7Z628 596 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 MSRB3Q8IXL7 192 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 RNF217Q8TC41 542 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 MAGEE2Q8TD90 523 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 STON2Q8WXE9 905 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC38A4Q969I6 547 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 TAAR8Q969N4 342 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 TNFRSF13CQ96RJ3 184 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 KATNB1Q9BVA0 655 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC13A4Q9UKG4 626 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 RCE1Q9Y256 329 aa19.43■□□□□ 0.7
TRAPPC4-210ENST00000531290 A0A0G2JND7 137 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 PRORSD1PA6NEY8 169 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 EVPLLA8MZ36 301 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 ATP8B1O43520 1251 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 F12P00748 615 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 CSF3P09919 207 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC6A2P23975 617 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 NCALDP61601 193 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 LOXL1Q08397 574 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 AGKQ53H12 422 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 ULK3Q6PHR2 472 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 H1FNTQ75WM6 255 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 LINGO2Q7L985 606 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 HIPK1Q86Z02 1210 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 GPR137CQ8N3F9 429 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 ANKK1Q8NFD2 765 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 ZNF607Q96SK3 696 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 TMEM27Q9HBJ8 222 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 VAPAQ9P0L0 249 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 CORO2BQ9UQ03 480 aa19.42■□□□□ 0.7
TRAPPC4-210ENST00000531290 TRAV36DV7A0A075B6V5 113 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 ARPC4-TTLL3A0A0A6YYG9 625 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 M0R082 166 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SERPINB7O75635 380 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 IFNA2P01563 188 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 VIMP08670 466 aaKnown RBP19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 HTR2AP28223 471 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 GRPRP30550 384 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SERPINF1P36955 418 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SNRPD2P62316 118 aaKnown RBP19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SCARB2Q14108 478 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SWI5Q1ZZU3 235 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 TMEM249Q2WGJ8 235 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 ZNF417Q8TAU3 575 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 PROX1Q92786 737 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SLC47A1Q96FL8 570 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 ZNF587Q96SQ5 575 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 PRR14Q9BWN1 585 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 TMEM38AQ9H6F2 299 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 CA10Q9NS85 328 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 SEC14L4Q9UDX3 406 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 GMEB1Q9Y692 573 aa19.41■□□□□ 0.7
TRAPPC4-210ENST00000531290 RPL36A-HNRNPH2H7BZ11 118 aa19.4■□□□□ 0.7
TRAPPC4-210ENST00000531290 AKAP8O43823 692 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms