RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 PTBP1P26599 531 aaKnown RBP eCLIP6.76□□□□□ -1.332e-7■■■■□ 23.9
CTNND1-229ENST00000531014 CSKP41240 450 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 ATP1B3P54709 279 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 CTXN1P60606 82 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 FAM69BQ5VUD6 431 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 MDGA2Q7Z553 956 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 CDH26Q8IXH8 852 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 TMEM217Q8N7C4 229 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF845Q96IR2 970 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 TRIB1Q96RU8 372 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 ATG101Q9BSB4 218 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 SOX7Q9BT81 388 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 OR10A2Q9H208 303 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 EXOSC3Q9NQT5 275 aaKnown RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 STEAP1Q9UHE8 339 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 SERTAD3Q9UJW9 196 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 NOSIPQ9Y314 301 aaKnown RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 SBF2Q86WG5 1849 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF816-ZNF321PA0A0X1KG74 233 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 TCRBV21S2A2A0A5A6 115 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 DCTN6O00399 190 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 CRXO43186 299 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 NDUFB2O95178 105 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 FABP4P15090 132 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 PMCHP20382 165 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 APEX1P27695 318 aaKnown RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 HMGCLP35914 325 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 TGFBR1P36897 503 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 LIMK1P53667 647 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 PRPS1P60891 318 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 GHRHRQ02643 423 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 LTBQ06643 244 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 IAH1Q2TAA2 248 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 SLC22A6Q4U2R8 563 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 AGTRAPQ6RW13 159 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 LYPD4Q6UWN0 246 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 NRARPQ7Z6K4 114 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 C12orf76Q8N812 135 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 NUP43Q8NFH3 380 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 OR4K5Q8NGD3 323 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 OR10D4PQ8NGN7 298 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 DYNC2LI1Q8TCX1 351 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 ASB11Q8WXH4 323 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 CDS1Q92903 461 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 BARX1Q9HBU1 254 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-229ENST00000531014 PRTFDC1Q9NRG1 225 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 OR14J1Q9UGF5 321 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 OR5V1Q9UGF6 321 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 SLC7A7Q9UM01 511 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 HHLA2Q9UM44 414 aa6.76□□□□□ -1.33
CTNND1-229ENST00000531014 TJP1Q07157 1748 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 A6NDN8 102 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TMEM8BA6NDV4 472 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TAAR5O14804 337 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TGM5O43548 720 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 OR8U8P0C7N1 319 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 RNH1P13489 461 aaKnown RBP6.75□□□□□ -1.33
CTNND1-229ENST00000531014 PTAFRP25105 342 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 APLNRP35414 380 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 KCNQ1P51787 676 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TAS2R45P59539 299 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 KEAP1Q14145 624 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 RAET1LQ5VY80 246 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 USP53Q70EK8 1073 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF534Q76KX8 674 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TMEM135Q86UB9 458 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 CNTN4Q8IWV2 1026 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 OR2A1Q8NGT9 310 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 KCTD12Q96CX2 325 aaKnown RBP6.75□□□□□ -1.33
CTNND1-229ENST00000531014 SUSD3Q96L08 255 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 CCNL2Q96S94 520 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-229ENST00000531014 ABHD6Q9BV23 337 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 DUSP23Q9BVJ7 150 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 BOCQ9BWV1 1114 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 HEYLQ9NQ87 328 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-229ENST00000531014 FBXO34Q9NWN3 711 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 RNF11Q9Y3C5 154 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 SLC22A7Q9Y694 548 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TMEM150BA6NC51 233 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 A6NIZ1 184 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 FAM159BA6NKW6 160 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 SHISA7A6NL88 538 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 G3V3Y1 287 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 CD1CP29017 333 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 CD80P33681 288 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 TCTAP57738 103 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 DNAJB13P59910 316 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 RAP1BP61224 184 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 RCAN2Q14206 197 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 ACOT6Q3I5F7 207 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-229ENST00000531014 KIAA0895LQ68EN5 471 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 CATSPERDQ86XM0 798 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 L3MBTL4Q8NA19 623 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 OR13C4Q8NGS5 318 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 PSMG2Q969U7 264 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 SHISA4Q96DD7 197 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 ELF4Q99607 663 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-229ENST00000531014 GPA33Q99795 319 aa6.75□□□□□ -1.33
CTNND1-229ENST00000531014 ATF6BQ99941 703 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms