RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 A0A1W2PR64 198 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 CTAGE15A4D2H0 777 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 C4orf51C9J302 202 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PGRMC1O00264 195 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 CLDN4O14493 209 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ERI3O43414 337 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 OR10H2O60403 315 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ABCB1P08183 1280 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SERPINA6P08185 405 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SMIM10L1P0DMW3 83 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 CD1EP15812 388 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ZNF10P21506 573 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PPP2R1BP30154 601 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SLC6A6P31641 620 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 RAD52P43351 418 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SLC9A3P48764 834 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 FNTAP49354 379 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 HSD17B7P56937 341 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 BTN3A2P78410 334 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PLGLB1Q02325 96 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PPP1R7Q15435 360 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SNAPC1Q16533 368 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PPP1R3AQ16821 1122 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 FAM45BPQ6NSW5 357 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SBSNQ6UWP8 590 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 RGS9BPQ6ZS82 235 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 TMPRSS11FQ6ZWK6 438 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 FRA10AC1Q70Z53 315 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 CTAGE6Q86UF2 777 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 THOC6Q86W42 341 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 CCDC71Q8IV32 467 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ARHGAP24Q8N264 748 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 RPRMLQ8N4K4 120 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 LILRB4Q8NHJ6 448 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 FAM45AQ8TCE6 357 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 NCLNQ969V3 563 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SMIM10Q96HG1 83 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 MS4A14Q96JA4 679 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 MS4A10Q96PG2 267 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 EGFL8Q99944 293 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ZNF559Q9BR84 538 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 KCNJ16Q9NPI9 418 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PRTFDC1Q9NRG1 225 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 PNO1Q9NRX1 252 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 HPF1Q9NWY4 346 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 CRNNQ9UBG3 495 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ASIC3Q9UHC3 531 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ZNF223Q9UK11 482 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 IKZF3Q9UKT9 509 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 RNF6Q9Y252 685 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 SLC22A14Q9Y267 594 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 MRPS33Q9Y291 106 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 EXOGQ9Y2C4 368 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 YARS2Q9Y2Z4 477 aaKnown RBP5.87□□□□□ -1.47
CSDE1-213ENST00000530784 ADGRG4Q8IZF6 3080 aa5.87□□□□□ -1.47
CSDE1-213ENST00000530784 A0A0G2JN53 185 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 FAM166BA8MTA8 275 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 NPIPA2E9PIF3 369 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 NPIPA3F8WFD2 350 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CDC7O00311 574 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 DNALI1O14645 258 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 BCKDKO14874 412 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 BANF1O75531 89 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 OR2J2O76002 312 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 TOXO94900 526 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 OR6B1O95007 311 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 HOXD4P09016 255 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 HPDP32754 393 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 SOX3P41225 446 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 HNMTP50135 292 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 RAB38P57729 211 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 NUP107P57740 925 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 PPIAP62937 165 aaKnown RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CCZ1BP86790 482 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CCZ1P86791 482 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CDKL1Q00532 357 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 TFF3Q07654 80 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 RCN2Q14257 317 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 PHLDA2Q53GA4 152 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CES4AQ5XG92 561 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 TRIM40Q6P9F5 258 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 TMIGD1Q6UXZ0 262 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 HSDL2Q6YN16 418 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 SLC22A16Q86VW1 577 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CLYBLQ8N0X4 340 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 PDIK1LQ8N165 341 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 TTLQ8NG68 377 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 OR2M7Q8NG81 312 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CFAP36Q96G28 342 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 PDLIM5Q96HC4 596 aaKnown RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 RASL10BQ96S79 203 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 TTTY12Q9BZ98 90 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 UCK2Q9BZX2 261 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 KLHL4Q9C0H6 718 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 AICDAQ9GZX7 198 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 WNT5BQ9H1J7 359 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 DEFB127Q9H1M4 99 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 ZDHHC11Q9H8X9 412 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 COPS7BQ9H9Q2 264 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms