RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	OR8D4	Q8NGM9	314 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	OR5H6	Q8NGV6	325 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	XAGE5	Q8WWM1	108 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	CCNL2	Q96S94	520 aa	Predicted RBP	13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	G6PC3	Q9BUM1	346 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	DEFB126	Q9BYW3	111 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	WWTR1	Q9GZV5	400 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	ANKRD19P	Q9H560	264 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	POLE3	Q9NRF9	147 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	OR10H1	Q9Y4A9	318 aa		13.31	□□□□□ -0.28
NR1H3-231	ENST00000529540	TRBV11-1	A0A0K0K1C0	115 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	SMIM30	A4D0T7	59 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	SHOX	O15266	292 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	LRRTM2	O43300	516 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	AKR7A2	O43488	359 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	LALBA	P00709	142 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	CD79B	P40259	229 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	INPP1	P49441	399 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	AP2S1	P53680	142 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	ATP12A	P54707	1039 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	CDH11	P55287	796 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	POU6F2	P78424	691 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	PSG6	Q00889	435 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	AIMP2	Q13155	320 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	DUSP8	Q13202	625 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	FAM69B	Q5VUD6	431 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	HACD4	Q5VWC8	232 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	HEPHL1	Q6MZM0	1159 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	RFPL4B	Q6ZWI9	263 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	C9orf40	Q8IXQ3	194 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	CLEC1A	Q8NC01	280 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	OR5D16	Q8NGK9	328 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	OR6T1	Q8NGN1	323 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	NEIL3	Q8TAT5	605 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	OIT3	Q8WWZ8	545 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	OTULIN	Q96BN8	352 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	C16orf58	Q96GQ5	468 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	GPR137	Q96N19	417 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	ARHGDIG	Q99819	225 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	DHRS9	Q9BPW9	319 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	ZNF649	Q9BS31	505 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	YIPF4	Q9BSR8	244 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	EGLN3	Q9H6Z9	239 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	CACYBP	Q9HB71	228 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	ZNF160	Q9HCG1	818 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	ATP13A2	Q9NQ11	1180 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	PTTG3P	Q9NZH4	202 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	MALT1	Q9UDY8	824 aa		13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	TMA7	Q9Y2S6	64 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540	MRPS18B	Q9Y676	258 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-231	ENST00000529540		A0A087WUU8	490 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540		A0A0G2JPF8	293 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	HNRNPCL2	B2RXH8	293 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	HNRNPCL3	B7ZW38	293 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	CDK2AP1	O14519	115 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	T	O15178	435 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	NOS1AP	O75052	506 aa	Predicted RBP	13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	SERPINA7	P05543	415 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	HNRNPCL4	P0DMR1	293 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	SLC6A1	P30531	599 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	LCN1	P31025	176 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	GABRA3	P34903	492 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	MTNR1B	P49286	362 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	RIPPLY1	Q0D2K3	151 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	TRAM2	Q15035	370 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	DUSP5	Q16690	384 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	ARHGAP11B	Q3KRB8	267 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	PLA1A	Q53H76	456 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	SLC37A3	Q8NCC5	494 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	SLC22A8	Q8TCC7	542 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	DOK4	Q8TEW6	326 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	ADIPOR1	Q96A54	375 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	KCTD12	Q96CX2	325 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	GAL3ST4	Q96RP7	486 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	DCLRE1C	Q96SD1	692 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	RERGL	Q9H628	205 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	GALNT9	Q9HCQ5	603 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	EMC7	Q9NPA0	242 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	AUP1	Q9Y679	476 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	AHCTF1	Q8WYP5	2266 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	WDFY3	Q8IZQ1	3526 aa		13.29	□□□□□ -0.28
NR1H3-231	ENST00000529540	SHISA3	A0PJX4	238 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	C7orf66	A4D0T2	115 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	CDC14C	A4D256	554 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	LINC00862	A6NCI5	91 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	KLK10	O43240	276 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	STX11	O75558	287 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	APOL3	O95236	402 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	CHRM4	P08173	479 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	CT45A8	P0DMV1	189 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	CT45A9	P0DMV2	189 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	HTR1F	P30939	366 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	AGFG1	P52594	562 aa	Known RBP	13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	DECR1	Q16698	335 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	CT45A2	Q5DJT8	189 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	DCAF10	Q5QP82	559 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	DCST2	Q5T1A1	773 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	VASN	Q6EMK4	673 aa		13.28	□□□□□ -0.28
NR1H3-231	ENST00000529540	VASH2	Q86V25	355 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms