RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MRPS31Q92665 395 aaKnown RBP2.83□□□□□ -1.96
CTR9-204ENST00000529355 PPP1R14BQ96C90 147 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 NRBF2Q96F24 287 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 C7orf34Q96L11 122 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 TGM7Q96PF1 710 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 CHRDL1Q9BU40 450 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 OSBPL10Q9BXB5 764 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 TSGA10Q9BZW7 698 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 SELENOIQ9C0D9 397 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 NSRP1Q9H0G5 558 aaKnown RBP2.83□□□□□ -1.96
CTR9-204ENST00000529355 PRELID1Q9Y255 219 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 MRPS33Q9Y291 106 aaKnown RBP2.83□□□□□ -1.96
CTR9-204ENST00000529355 POLDIP2Q9Y2S7 368 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 TIMM10BQ9Y5J6 103 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 V9GYY5 206 aaPredicted RBP2.83□□□□□ -1.96
CTR9-204ENST00000529355 GAKO14976 1311 aa2.83□□□□□ -1.96
CTR9-204ENST00000529355 PHF3Q92576 2039 aaKnown RBP2.83□□□□□ -1.96
CTR9-204ENST00000529355 IQANK1A0A1B0GTG1 560 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 CLRN2A0PK11 232 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 RBMY1BA6NDE4 496 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 RBMY1EA6NEQ0 496 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 C11orf94C9JXX5 98 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 ERLIN2O94905 339 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 RBMY1DP0C7P1 496 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 RBMY1A1P0DJD3 496 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 TROVE2P10155 538 aaKnown RBP eCLIP2.82□□□□□ -1.96
CTR9-204ENST00000529355 IDO1P14902 403 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 NCK1P16333 377 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 COX5AP20674 150 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 CHMLP26374 656 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 YWHABP31946 246 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 KPNA2P52292 529 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 DR1Q01658 176 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 VGLL4Q14135 290 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 TATDN3Q17R31 274 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 LRRC23Q53EV4 343 aaPredicted RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 DMRTC1Q5HYR2 192 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 C8orf74Q6P047 294 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 ZNF620Q6ZNG0 422 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 SLC35F2Q8IXU6 374 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 SPERTQ8NA61 448 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 OR10G3Q8NGC4 313 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 FAM110BQ8TC76 370 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 BLOC1S5Q8TDH9 187 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 THRSPQ92748 146 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 OXGR1Q96P68 337 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 RNF2Q99496 336 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 P2RY13Q9BPV8 354 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 NRIP2Q9BQI9 281 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 UQCC2Q9BRT2 126 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 ERP44Q9BS26 406 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 SPZ1Q9BXG8 430 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 ACTR6Q9GZN1 396 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 NCOR1P1Q9H4R4 102 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 EML4Q9HC35 981 aaKnown RBP2.82□□□□□ -1.96
CTR9-204ENST00000529355 CCL28Q9NRJ3 127 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 NUDT15Q9NV35 164 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 TRAPPC4Q9Y296 219 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 SLCO1B1Q9Y6L6 691 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 SH3TC1Q8TE82 1336 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 MAPK8IP3Q9UPT6 1336 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 CCDC144AA2RUR9 1427 aa2.82□□□□□ -1.96
CTR9-204ENST00000529355 K7EQM0 130 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 SNAI2O43623 268 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 NMT2O60551 498 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 TBX19O60806 448 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ATP5LO75964 103 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 KRT8P05787 483 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ICAM2P13598 275 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 IMPDH1P20839 514 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 DDOSTP39656 456 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 CCT6AP40227 531 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 MAP3K8P41279 467 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 QARSP47897 775 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 CASP4P49662 377 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 PKNOX1P55347 436 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 TPM4P67936 248 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 PPIDQ08752 370 aaKnown RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 PPP1R7Q15435 360 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 RSPO1Q2MKA7 263 aaPredicted RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 TFDP3Q5H9I0 405 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ZNF691Q5VV52 312 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 OR52E8Q6IFG1 317 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 C6orf89Q6UWU4 347 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ZNF621Q6ZSS3 439 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 PGAP1Q75T13 922 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 NLRP9Q7RTR0 991 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 PAQR7Q86WK9 346 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 SLC7A5P1Q8MH63 180 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 TRIML2Q8N7C3 387 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 LINC00469Q8N7U9 141 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 SYT14Q8NB59 555 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 OR6C4Q8NGE1 309 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 OR52H1Q8NGJ2 320 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 HTR3CQ8WXA8 447 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 FCRL1Q96LA6 429 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 ZNF607Q96SK3 696 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 HIST1H4GQ99525 98 aa2.81□□□□□ -1.96
CTR9-204ENST00000529355 HDHD3Q9BSH5 251 aaPredicted RBP2.81□□□□□ -1.96
CTR9-204ENST00000529355 OR11A1Q9GZK7 315 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms