RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 E7EQL1 145 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 GYG2O15488 501 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 AHSA1O95433 338 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 NPPAP01160 153 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-212ENST00000527887 P2RY4P51582 365 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 SLC2A7Q6PXP3 512 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 DNM1P46Q6ZS02 220 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 CREB3L2Q70SY1 520 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-212ENST00000527887 SERPINA11Q86U17 422 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 GPAT4Q86UL3 456 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 KRT73Q86Y46 540 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 MUC15Q8N387 334 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 LSMEM1Q8N8F7 131 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 BHLHE22Q8NFJ8 381 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-212ENST00000527887 EFCAB1Q9HAE3 211 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 CORO2BQ9UQ03 480 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 CHST2Q9Y4C5 530 aa12.45□□□□□ -0.42
CAPN1-212ENST00000527887 PRORSD1PA6NEY8 169 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 B2RBV5 119 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 M0R1B8 84 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 FRS3O43559 492 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 FZD7O75084 574 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 KRT33AO76009 404 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 IGHV4-39P01824 125 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 PNMTP11086 282 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 PRG2P13727 222 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 HOXB9P17482 250 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-212ENST00000527887 FABP6P51161 128 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 RPS26P11Q5JNZ5 115 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-212ENST00000527887 C11orf71Q6IPW1 123 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 REEP3Q6NUK4 255 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 HACD2Q6Y1H2 254 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 FUNDC1Q8IVP5 155 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-212ENST00000527887 DNAJA4Q8WW22 397 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-212ENST00000527887 SPDL1Q96EA4 605 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 ZNF385AQ96PM9 386 aaKnown RBP12.44□□□□□ -0.42
CAPN1-212ENST00000527887 RHNO1Q9BSD3 238 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 LINC00470Q9BZP3 86 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 ADPRHL2Q9NX46 363 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 RPS6KB2Q9UBS0 482 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 B3GALT5Q9Y2C3 310 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 NDUFAF1Q9Y375 327 aa12.44□□□□□ -0.42
CAPN1-212ENST00000527887 CADP27708 2225 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ELOA3DA6NLF2 546 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-212ENST00000527887 EVPLLA8MZ36 301 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 RNF223E7ERA6 249 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ZNF587BE7ETH6 402 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 TP53P04637 393 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-212ENST00000527887 NUDT7P0C024 238 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ARAFP10398 606 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 GTF2E2P29084 291 aaKnown RBP12.43□□□□□ -0.42
CAPN1-212ENST00000527887 PCSK6P29122 969 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ACVR1BP36896 505 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 FOXG1P55316 489 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-212ENST00000527887 SH3BGRP55822 239 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-212ENST00000527887 CDK6Q00534 326 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 CHRNB3Q05901 458 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 BNIP2Q12982 314 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 MFSD13AQ14CX5 517 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 RAB35Q15286 201 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 C3orf36Q3SXR2 165 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ELOA3BQ3SY89 546 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 AGKQ53H12 422 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 GCNT6Q5T4J0 391 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 DHRS4L2Q6PKH6 230 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 PCYOX1LQ8NBM8 494 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ELOA3Q8NG57 546 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 ZNF607Q96SK3 696 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 TMEM38AQ9H6F2 299 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 CCDC167Q9P0B6 97 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 PMF1-BGLAPU3KQ54 211 aa12.43□□□□□ -0.42
CAPN1-212ENST00000527887 LOC102725191A0A1B0GVB3 256 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 A0A1W2PR80 420 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 INAFM1C9JVW0 142 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 FTCDNL1E5RQL4 147 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 H7C417 338 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 GSC2O15499 205 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 TLX2O43763 284 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-212ENST00000527887 SERPINB7O75635 380 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
CAPN1-212ENST00000527887 ZNF43P17038 809 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 GPX2P18283 190 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 SLC6A2P23975 617 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 SPATS1Q496A3 300 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 C9orf135Q5VTT2 229 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 C16orf89Q6UX73 402 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 SNX32Q86XE0 403 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 EPHX4Q8IUS5 362 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 FAM169BQ8N8A8 192 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 RBM15BQ8NDT2 890 aaKnown RBP12.42□□□□□ -0.42
CAPN1-212ENST00000527887 OR6S1Q8NH40 331 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms