RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ANKRD13BQ86YJ7 626 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 Q8N402 240 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 ZNF454Q8N9F8 522 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 FRMD6Q96NE9 622 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 SCP2D1Q9UJQ7 156 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 ARRDC5A6NEK1 342 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 GLP1RP43220 463 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 SLC16A14Q7RTX9 510 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 MRPL21Q7Z2W9 205 aaKnown RBP13.81□□□□□ -0.2
USP47-207ENST00000527733 ZNF554Q86TJ5 538 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 YRDCQ86U90 279 aaKnown RBP13.81□□□□□ -0.2
USP47-207ENST00000527733 RASD2Q96D21 266 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 AKR7A3O95154 331 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 PEBP1P30086 187 aaKnown RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 EMDP50402 254 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 EMP3P54852 163 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 SCRN3Q0VDG4 424 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 STK11Q15831 433 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 OLFML2AQ68BL7 652 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 PLCZ1Q86YW0 608 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 GINS4Q9BRT9 223 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 MENTQ9BUN1 341 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 CST11Q9H112 138 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FUCA1P04066 466 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 TMEM225BP0DP42 221 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 KDM8Q8N371 416 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 ZNF511Q8NB15 262 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 ZFAND2BQ8WV99 257 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 MUL1Q969V5 352 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 GABARAPL3Q9BY60 117 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 AK6Q9Y3D8 172 aaKnown RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 PCDHGA10Q9Y5H3 936 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 HSPA12AO43301 675 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FBXO45P0C2W1 286 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 RPL27P61353 136 aaKnown RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 LSAMPQ13449 338 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 NKG7Q16617 165 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 BCDIN3DQ7Z5W3 292 aaKnown RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 NAXDQ8IW45 347 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 OR8S1Q8NH09 359 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 UCN3Q969E3 161 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FAM46BQ96A09 425 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 VWCEQ96DN2 955 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FUZQ9BT04 418 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 ZNF768Q9H5H4 540 aaKnown RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 WDR76Q9H967 626 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 GLS2Q9UI32 602 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 TMEM184BQ9Y519 407 aaPredicted RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 A0A1W2PQL4 384 aaPredicted RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 DCDC2BA2VCK2 349 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 PTHP01270 115 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 THBS2P35442 1172 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FGFBP1Q14512 234 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 SLC35D3Q5M8T2 416 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 HES5Q5TA89 166 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 FAM26EQ8N5C1 309 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 OR5M1Q8NGP8 315 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 NDNFQ8TB73 568 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 DNASE2BQ8WZ79 361 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 CLCC1Q96S66 551 aa13.8□□□□□ -0.2
USP47-207ENST00000527733 SIRT3Q9NTG7 399 aaPredicted RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 PCYT1BQ9Y5K3 369 aaPredicted RBP13.8□□□□□ -0.2
USP47-207ENST00000527733 EEF1E1O43324 174 aaKnown RBP13.79□□□□□ -0.2
USP47-207ENST00000527733 WNT1P04628 370 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 ERGP11308 486 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 SUMO3P55854 103 aaPredicted RBP13.79□□□□□ -0.2
USP47-207ENST00000527733 PRTGQ2VWP7 1150 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 ACSM5Q6NUN0 579 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 KIRREL2Q6UWL6 708 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 TMEM179BQ7Z7N9 219 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 MRGPRX4Q96LA9 322 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 CEPT1Q9Y6K0 416 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 ZAR1LA6NP61 321 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 TTLL8A6PVC2 850 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 DISC1C4P0D8 188 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 MAKP20794 623 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 ABCD3P28288 659 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 MAGEA2P43356 314 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 SYT14P1Q58G82 188 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 C9orf135Q5VTT2 229 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 FAHD1Q6P587 224 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 OR4C3Q8NH37 302 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 MRI1Q9BV20 369 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 OR11A1Q9GZK7 315 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 CHST11Q9NPF2 352 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 P4HTMQ9NXG6 502 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 RAD51DO75771 328 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 GLCEO94923 617 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 TBXA2RP21731 343 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 MAN2A2P49641 1150 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 SIRPAP78324 504 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 ZNF517Q6ZMY9 492 aaPredicted RBP13.79□□□□□ -0.2
USP47-207ENST00000527733 ZNF584Q8IVC4 421 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 DND1Q8IYX4 353 aaKnown RBP13.79□□□□□ -0.2
USP47-207ENST00000527733 MBOAT4Q96T53 435 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 PHOX2BQ99453 314 aa13.79□□□□□ -0.2
USP47-207ENST00000527733 ZNF639Q9UID6 485 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms