RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 NEU4Q8WWR8 484 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-206ENST00000526966 HPS1Q92902 700 aa16.24■□□□□ 0.19
CAPN1-206ENST00000526966 OR52E6Q96RD3 313 aa16.24■□□□□ 0.19
CAPN1-206ENST00000526966 DOK1Q99704 481 aa16.24■□□□□ 0.19
CAPN1-206ENST00000526966 RCE1Q9Y256 329 aa16.24■□□□□ 0.19
CAPN1-206ENST00000526966 ZNF443Q9Y2A4 671 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-206ENST00000526966 CHST2Q9Y4C5 530 aa16.24■□□□□ 0.19
CAPN1-206ENST00000526966 hCG_2039718K7EN88 272 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 ZNF432O94892 652 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 KRT75O95678 551 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 IGFBP1P08833 259 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-206ENST00000526966 CELA3BP08861 270 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 PRG2P13727 222 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 DAOP14920 347 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 IL2RGP31785 369 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 CHN2P52757 468 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 ROR2Q01974 943 aaKnown RBP16.23■□□□□ 0.19
CAPN1-206ENST00000526966 MFSD8Q8NHS3 518 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 PTDSS2Q9BVG9 487 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 SSU72Q9NP77 194 aaKnown RBP16.23■□□□□ 0.19
CAPN1-206ENST00000526966 SLC6A13Q9NSD5 602 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 CALML5Q9NZT1 146 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 GPR45Q9Y5Y3 372 aa16.23■□□□□ 0.19
CAPN1-206ENST00000526966 TMEM129A0AVI4 362 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 SDHDO14521 159 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 TM9SF1O15321 606 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 AHSA1O95433 338 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 PNMTP11086 282 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 CBR1P16152 277 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 NPR2P20594 1047 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 THBS4P35443 961 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 CRISP3P54108 245 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 ZNF786Q8N393 782 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 CLIP4Q8N3C7 705 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 SVOPLQ8N434 492 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 C1orf159Q96HA4 380 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 PNPOQ9NVS9 261 aa16.22■□□□□ 0.19
CAPN1-206ENST00000526966 IGHV2OR16-5A0A0B4J2B6 119 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 ZNF503-AS2A6NEH8 195 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 RFXANKO14593 260 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 TCF21O43680 179 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 BCHEP06276 602 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 ERCC1P07992 297 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 ETFAP13804 333 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 BGNP21810 368 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 APEX1P27695 318 aaKnown RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 CDH15P55291 814 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 ARF1P84077 181 aaKnown RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 POU3F1Q03052 451 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 EGR4Q05215 589 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 RIN1Q13671 783 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 SERPINA11Q86U17 422 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 ZCCHC24Q8N2G6 241 aaKnown RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 LINC01356Q8N9X3 169 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 GLB1L3Q8NCI6 653 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 SLC38A5Q8WUX1 472 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 ANKRD27Q96NW4 1050 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 SPATA9Q9BWV2 254 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 B3GAT1Q9P2W7 334 aa16.21■□□□□ 0.19
CAPN1-206ENST00000526966 TMEFF2Q9UIK5 374 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-206ENST00000526966 NCF2P19878 526 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-206ENST00000526966 ARR3P36575 388 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 CLDN17P56750 224 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 GABPB1Q06547 395 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-206ENST00000526966 LARS2Q15031 903 aaKnown RBP16.2■□□□□ 0.18
CAPN1-206ENST00000526966 RPS26P11Q5JNZ5 115 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-206ENST00000526966 SPATA21Q7Z572 469 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 MEX3DQ86XN8 651 aaKnown RBP16.2■□□□□ 0.18
CAPN1-206ENST00000526966 KDM8Q8N371 416 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 GPR35Q9HC97 309 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 FAM53CQ9NYF3 392 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 SEC14L4Q9UDX3 406 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 PCDHB14Q9Y5E9 798 aa16.2■□□□□ 0.18
CAPN1-206ENST00000526966 DYSFO75923 2080 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 VSTM5A8MXK1 200 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 SLC43A1O75387 559 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 ZCCHC18P0CG32 403 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 ZNF43P17038 809 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 ITGA2P17301 1181 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 RPS5P46782 204 aaKnown RBP16.19■□□□□ 0.18
CAPN1-206ENST00000526966 DSTNP60981 165 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 BST1Q10588 318 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 STX3Q13277 289 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 MPP2Q14168 576 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 ADRM1Q16186 407 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 KRT71Q3SY84 523 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 C6orf89Q6UWU4 347 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 CDK20Q8IZL9 346 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 UBASH3BQ8TF42 649 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 SLC35B4Q969S0 331 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 SLC25A36Q96CQ1 311 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 ZNF837Q96EG3 531 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-206ENST00000526966 KTI12Q96EK9 354 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-206ENST00000526966 TMEM19Q96HH6 336 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 OXGR1Q96P68 337 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 SNX18Q96RF0 628 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 ZBTB18Q99592 522 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 NOX3Q9HBY0 568 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 DYNLRB1Q9NP97 96 aa16.19■□□□□ 0.18
CAPN1-206ENST00000526966 A0A0G2JPF8 293 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms