RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 POMGNT2Q8NAT1 580 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 SEMA6DQ8NFY4 1073 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 PNPT1Q8TCS8 783 aaKnown RBP12.34□□□□□ -0.43
CPSF1-201ENST00000526271 WDR60Q8WVS4 1066 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 DDIT4LQ96D03 193 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 MAELQ96JY0 434 aaKnown RBP12.34□□□□□ -0.43
CPSF1-201ENST00000526271 ZNF75AQ96N20 296 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 NAA11Q9BSU3 229 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-201ENST00000526271 NUF2Q9BZD4 464 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 FKBP7Q9Y680 259 aa12.34□□□□□ -0.43
CPSF1-201ENST00000526271 ARHGAP32A7KAX9 2087 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 CFAP73A6NFT4 308 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 TRPC5OSA6NMA1 111 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 SDHDO14521 159 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 AGR2O95994 175 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 WNT11O96014 354 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 VIMP08670 466 aaKnown RBP12.33□□□□□ -0.44
CPSF1-201ENST00000526271 DAOP14920 347 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 LSP1P33241 339 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 HTR3AP46098 478 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 CDH15P55291 814 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 NME5P56597 212 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 TGFBR3Q03167 851 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 IQCCQ4KMZ1 466 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 GPAT4Q86UL3 456 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 NUP37Q8NFH4 326 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 MAGEE2Q8TD90 523 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-201ENST00000526271 STON2Q8WXE9 905 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 PMM1Q92871 262 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 SNX18Q96RF0 628 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 PLA2G12AQ9BZM1 189 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 OBP2BQ9NPH6 170 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 FGFR1OP2Q9NVK5 253 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 TMEM45AQ9NWC5 275 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 ADPRHL2Q9NX46 363 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 BTNL2Q9UIR0 455 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 WNK2Q9Y3S1 2297 aa12.33□□□□□ -0.44
CPSF1-201ENST00000526271 IGHV2OR16-5A0A0B4J2B6 119 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 GMNCA6NCL1 334 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 CCDC154A6NI56 674 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 hCG_2039718K7EN88 272 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 CFPP27918 469 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 GNGT1P63211 74 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
CPSF1-201ENST00000526271 MAD2L1Q13257 205 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-201ENST00000526271 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 GTDC1Q4AE62 458 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 SLC9B1Q4ZJI4 515 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-201ENST00000526271 C1QTNF12Q5T7M4 302 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 ANXA8L1Q5VT79 327 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 NHLRC1Q6VVB1 395 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 ZNF786Q8N393 782 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 SIKE1Q9BRV8 207 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 LINC00470Q9BZP3 86 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 PIF1Q9H611 641 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
CPSF1-201ENST00000526271 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-201ENST00000526271 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 E9PBE3 544 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 SEC14L2O76054 403 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 GPIP06744 558 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 PNMTP11086 282 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 BMP4P12644 408 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 CHI3L1P36222 383 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-201ENST00000526271 IDH3AP50213 366 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 SEC24CP53992 1094 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 AQP5P55064 265 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 HOXC5Q00444 222 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 ROR2Q01974 943 aaKnown RBP12.31□□□□□ -0.44
CPSF1-201ENST00000526271 SQLEQ14534 574 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 ELFN2Q5R3F8 820 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 C1orf140Q5VVS0 124 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 C1orf229Q6ZS94 237 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-201ENST00000526271 SERPINA11Q86U17 422 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 RFLNBQ8N5W9 214 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 RACGAP1Q9H0H5 632 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 WDR55Q9H6Y2 383 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-201ENST00000526271 MTHFD2LQ9H903 347 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-201ENST00000526271 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
CPSF1-201ENST00000526271 TMEFF2Q9UIK5 374 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-201ENST00000526271 IGKV1D-42A0A075B6H8 117 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 ZNF587BE7ETH6 402 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 RPL36A-HNRNPH2H7BZ11 118 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 TCF21O43680 179 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 SHOX2O60902 331 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-201ENST00000526271 HPRP00739 348 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 CRYAAP02489 173 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 DBIP07108 87 aaKnown RBP12.3□□□□□ -0.44
CPSF1-201ENST00000526271 ETFAP13804 333 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 CBR1P16152 277 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 DRD4P21917 467 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 APEX1P27695 318 aaKnown RBP12.3□□□□□ -0.44
CPSF1-201ENST00000526271 EPHA3P29320 983 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 S100A3P33764 101 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 MAP2K6P52564 334 aa12.3□□□□□ -0.44
CPSF1-201ENST00000526271 RUNX1T1Q06455 604 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms