RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 KIR2DL5AQ8N109 375 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 KIR2DL5BQ8NHK3 375 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 ACOT11Q8WXI4 607 aaPredicted RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 UFD1Q92890 307 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 ERP44Q9BS26 406 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 RIOK2Q9BVS4 552 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 CAPS2Q9BXY5 557 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 PLA2G2FQ9BZM2 168 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 VCXQ9H320 206 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 NHEJ1Q9H9Q4 299 aaPredicted RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 IL26Q9NPH9 171 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 SNX6Q9UNH7 406 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 MTCL1Q9Y4B5 1905 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 RPAP1Q9BWH6 1393 aaPredicted RBP2.59□□□□□ -2
CD44-215ENST00000525241 C12orf77C9JDV5 145 aa2.58□□□□□ -2
CD44-215ENST00000525241 C11orf94C9JXX5 98 aa2.58□□□□□ -2
CD44-215ENST00000525241 DLGAP1O14490 977 aa2.58□□□□□ -2
CD44-215ENST00000525241 ZNF324O75467 553 aaPredicted RBP2.58□□□□□ -2
CD44-215ENST00000525241 WISP3O95389 354 aaPredicted RBP2.58□□□□□ -2
CD44-215ENST00000525241 OXSR1O95747 527 aaPredicted RBP2.58□□□□□ -2
CD44-215ENST00000525241 PNMA6AP0CW24 399 aaPredicted RBP2.58□□□□□ -2
CD44-215ENST00000525241 HSMCR30P0CW71 290 aa2.58□□□□□ -2
CD44-215ENST00000525241 ZNF44P15621 663 aa2.58□□□□□ -2
CD44-215ENST00000525241 ABOP16442 354 aa2.58□□□□□ -2
CD44-215ENST00000525241 MAGP20916 626 aa2.58□□□□□ -2
CD44-215ENST00000525241 CMA1P23946 247 aa2.58□□□□□ -2
CD44-215ENST00000525241 PFN3P60673 137 aa2.58□□□□□ -2
CD44-215ENST00000525241 GGTLC2Q14390 218 aa2.58□□□□□ -2
CD44-215ENST00000525241 PTGES3Q15185 160 aaKnown RBP2.58□□□□□ -2
CD44-215ENST00000525241 CYTH1Q15438 398 aa2.58□□□□□ -2
CD44-215ENST00000525241 TMEM255AQ5JRV8 349 aa2.58□□□□□ -2
CD44-215ENST00000525241 OR4F3Q6IEY1 312 aa2.58□□□□□ -2
CD44-215ENST00000525241 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
CD44-215ENST00000525241 ZNF546Q86UE3 836 aa2.58□□□□□ -2
CD44-215ENST00000525241 SAXO1Q8IYX7 474 aa2.58□□□□□ -2
CD44-215ENST00000525241 OR4F15Q8NGB8 312 aa2.58□□□□□ -2
CD44-215ENST00000525241 OR10G9Q8NGN4 311 aa2.58□□□□□ -2
CD44-215ENST00000525241 FGF14Q92915 247 aa2.58□□□□□ -2
CD44-215ENST00000525241 SLC38A2Q96QD8 506 aa2.58□□□□□ -2
CD44-215ENST00000525241 YY1AP1Q9H869 796 aa2.58□□□□□ -2
CD44-215ENST00000525241 CYTL1Q9NRR1 136 aa2.58□□□□□ -2
CD44-215ENST00000525241 KCNIP1Q9NZI2 227 aa2.58□□□□□ -2
CD44-215ENST00000525241 DEC1Q9P2X7 70 aa2.58□□□□□ -2
CD44-215ENST00000525241 EPS15L1Q9UBC2 864 aa2.58□□□□□ -2
CD44-215ENST00000525241 GNPTGQ9UJJ9 305 aa2.58□□□□□ -2
CD44-215ENST00000525241 TBX21Q9UL17 535 aa2.58□□□□□ -2
CD44-215ENST00000525241 MRPS7Q9Y2R9 242 aaKnown RBP2.58□□□□□ -2
CD44-215ENST00000525241 IQANK1A0A1B0GTG1 560 aa2.57□□□□□ -2
CD44-215ENST00000525241 C12orf71A8MTZ7 269 aa2.57□□□□□ -2
CD44-215ENST00000525241 A8MXQ7 604 aa2.57□□□□□ -2
CD44-215ENST00000525241 MAGEB3O15480 346 aa2.57□□□□□ -2
CD44-215ENST00000525241 POLR2DO15514 142 aaKnown RBP2.57□□□□□ -2
CD44-215ENST00000525241 SS18L1O75177 396 aaPredicted RBP2.57□□□□□ -2
CD44-215ENST00000525241 TBPP20226 339 aa2.57□□□□□ -2
CD44-215ENST00000525241 IL12AP29459 219 aa2.57□□□□□ -2
CD44-215ENST00000525241 GRIA1P42261 906 aa2.57□□□□□ -2
CD44-215ENST00000525241 DUSP3P51452 185 aaPredicted RBP2.57□□□□□ -2
CD44-215ENST00000525241 REG3AQ06141 175 aa2.57□□□□□ -2
CD44-215ENST00000525241 RSPO1Q2MKA7 263 aaPredicted RBP2.57□□□□□ -2
CD44-215ENST00000525241 MFSD9Q8NBP5 474 aa2.57□□□□□ -2
CD44-215ENST00000525241 ZNF596Q8TC21 504 aa2.57□□□□□ -2
CD44-215ENST00000525241 DTX3LQ8TDB6 740 aa2.57□□□□□ -2
CD44-215ENST00000525241 COQ2Q96H96 371 aa2.57□□□□□ -2
CD44-215ENST00000525241 CEP170P1Q96L14 293 aa2.57□□□□□ -2
CD44-215ENST00000525241 CLCC1Q96S66 551 aa2.57□□□□□ -2
CD44-215ENST00000525241 ZSCAN5AQ9BUG6 496 aa2.57□□□□□ -2
CD44-215ENST00000525241 PARD6BQ9BYG5 372 aa2.57□□□□□ -2
CD44-215ENST00000525241 CLMPQ9H6B4 373 aa2.57□□□□□ -2
CD44-215ENST00000525241 PTBP2Q9UKA9 531 aaKnown RBP2.57□□□□□ -2
CD44-215ENST00000525241 TMCO1Q9UM00 188 aa2.57□□□□□ -2
CD44-215ENST00000525241 ATP10AO60312 1499 aa2.57□□□□□ -2
CD44-215ENST00000525241 NDC80O14777 642 aa2.56□□□□□ -2
CD44-215ENST00000525241 SLC31A2O15432 143 aa2.56□□□□□ -2
CD44-215ENST00000525241 MED7O43513 233 aa2.56□□□□□ -2
CD44-215ENST00000525241 SCGNO76038 276 aa2.56□□□□□ -2
CD44-215ENST00000525241 CCR1P32246 355 aa2.56□□□□□ -2
CD44-215ENST00000525241 PDIA2Q13087 525 aaKnown RBP2.56□□□□□ -2
CD44-215ENST00000525241 PLD1Q13393 1074 aa2.56□□□□□ -2
CD44-215ENST00000525241 OR5I1Q13606 314 aa2.56□□□□□ -2
CD44-215ENST00000525241 RFX4Q33E94 735 aa2.56□□□□□ -2
CD44-215ENST00000525241 CCDC152Q4G0S7 254 aa2.56□□□□□ -2
CD44-215ENST00000525241 PIANPQ8IYJ0 282 aa2.56□□□□□ -2
CD44-215ENST00000525241 TEX9Q8N6V9 391 aa2.56□□□□□ -2
CD44-215ENST00000525241 IPMKQ8NFU5 416 aa2.56□□□□□ -2
CD44-215ENST00000525241 MCOLN3Q8TDD5 553 aa2.56□□□□□ -2
CD44-215ENST00000525241 ASB9Q96DX5 294 aa2.56□□□□□ -2
CD44-215ENST00000525241 MTMR9Q96QG7 549 aa2.56□□□□□ -2
CD44-215ENST00000525241 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
CD44-215ENST00000525241 GPR61Q9BZJ8 451 aa2.56□□□□□ -2
CD44-215ENST00000525241 CDC42EP4Q9H3Q1 356 aaKnown RBP2.56□□□□□ -2
CD44-215ENST00000525241 TPK1Q9H3S4 243 aa2.56□□□□□ -2
CD44-215ENST00000525241 RANBP3Q9H6Z4 567 aaPredicted RBP2.56□□□□□ -2
CD44-215ENST00000525241 LY9Q9HBG7 655 aa2.56□□□□□ -2
CD44-215ENST00000525241 ZFP14Q9HCL3 533 aa2.56□□□□□ -2
CD44-215ENST00000525241 GLRX2Q9NS18 164 aa2.56□□□□□ -2
CD44-215ENST00000525241 GIN1Q9NXP7 522 aa2.56□□□□□ -2
CD44-215ENST00000525241 ZNF226Q9NYT6 803 aa2.56□□□□□ -2
CD44-215ENST00000525241 HEBP2Q9Y5Z4 205 aa2.56□□□□□ -2
CD44-215ENST00000525241 SNNO75324 88 aaPredicted RBP2.55□□□□□ -2
CD44-215ENST00000525241 SUPT3HO75486 399 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms