RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 FAM91A1Q658Y4 838 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 C5orf46Q6UWT4 87 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 RANBP3LQ86VV4 465 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-203ENST00000525013 ALKBH3Q96Q83 286 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-203ENST00000525013 IGKV1D-42A0A075B6H8 117 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 TRAV36DV7A0A075B6V5 113 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 OR6C65A6NJZ3 312 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 M0QX08 132 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 M0R082 166 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 AIM2O14862 343 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 LY6G6DO95868 133 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 LGI1O95970 557 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 WNT11O96014 354 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 OPN1SWP03999 348 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 SLC25A3Q00325 362 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 HIKESHIQ53FT3 197 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 AGAP6Q5VW22 663 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 NET1Q7Z628 596 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-203ENST00000525013 ZNF417Q8TAU3 575 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 POM121Q96HA1 1249 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 OXGR1Q96P68 337 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 ZNF587Q96SQ5 575 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-203ENST00000525013 WFDC6Q9BQY6 131 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 TRAF4Q9BUZ4 470 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-203ENST00000525013 HIVEP2P31629 2446 aa16.26■□□□□ 0.19
CAPN1-203ENST00000525013 A0A0B4J2E0 115 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 A0A1B0GX12 115 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 E7EQL1 145 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 M0R3H8 397 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 UPK3AO75631 287 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 CD8AP01732 235 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 PCBP3P57721 371 aaKnown RBP16.25■□□□□ 0.19
CAPN1-203ENST00000525013 VEZF1Q14119 521 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 HMBOX1Q6NT76 420 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 H1FNTQ75WM6 255 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-203ENST00000525013 C10orf53Q8N6V4 93 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 OR10A6Q8NH74 314 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 EPYCQ99645 322 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 MCHR1Q99705 422 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 DHRS9Q9BPW9 319 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 KAT8Q9H7Z6 458 aaKnown RBP16.25■□□□□ 0.19
CAPN1-203ENST00000525013 EVA1AQ9H8M9 152 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 FGFR1OP2Q9NVK5 253 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 KLHL14Q9P2G3 628 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 B3GALT5Q9Y2C3 310 aa16.25■□□□□ 0.19
CAPN1-203ENST00000525013 A0A087WUJ7 227 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 TPST2O60704 377 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 HEXAP06865 529 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 VIMP08670 466 aaKnown RBP16.24■□□□□ 0.19
CAPN1-203ENST00000525013 NQO1P15559 274 aaKnown RBP16.24■□□□□ 0.19
CAPN1-203ENST00000525013 HOXB4P17483 251 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-203ENST00000525013 FABP6P51161 128 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 ARFIP2P53365 341 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 CDH12P55289 794 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 TNK1Q13470 666 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 CYLC2Q14093 348 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-203ENST00000525013 DUSP7Q16829 419 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 CLEC12BQ2HXU8 276 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 PATL1Q86TB9 770 aaKnown RBP16.24■□□□□ 0.19
CAPN1-203ENST00000525013 DTX2Q86UW9 622 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 SLC30A8Q8IWU4 369 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 FBXL14Q8N1E6 418 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 OR1K1Q8NGR3 316 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 SLC26A7Q8TE54 656 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 HS6ST2Q96MM7 605 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 FKRPQ9H9S5 495 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 B3GAT1Q9P2W7 334 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 ATP23Q9Y6H3 246 aa16.24■□□□□ 0.19
CAPN1-203ENST00000525013 FN1P02751 2386 aaKnown RBP16.24■□□□□ 0.19
CAPN1-203ENST00000525013 FBP2O00757 339 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 SLC43A1O75387 559 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 IGHV4-39P01824 125 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 TTKP33981 857 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 PCGF2P35227 344 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 UBE2NP61088 152 aaKnown RBP16.23■□□□□ 0.19
CAPN1-203ENST00000525013 ROR2Q01974 943 aaKnown RBP16.23■□□□□ 0.19
CAPN1-203ENST00000525013 MFSD13AQ14CX5 517 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 ETFDHQ16134 617 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 TRMT5Q32P41 509 aaKnown RBP16.23■□□□□ 0.19
CAPN1-203ENST00000525013 TBRG1Q3YBR2 411 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 MMEL1Q495T6 779 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 C1QTNF12Q5T7M4 302 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 INTS11Q5TA45 600 aaKnown RBP16.23■□□□□ 0.19
CAPN1-203ENST00000525013 B3GLCTQ6Y288 498 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 LINGO2Q7L985 606 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 GPR137CQ8N3F9 429 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 VANGL1Q8TAA9 524 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-203ENST00000525013 ARHGDIGQ99819 225 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 ASPNQ9BXN1 380 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 LINC00470Q9BZP3 86 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 ZNF446Q9NWS9 450 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 RCE1Q9Y256 329 aa16.23■□□□□ 0.19
CAPN1-203ENST00000525013 JMJD1CQ15652 2540 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 A0A096LPE4 126 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 A0A1W2PPZ6 126 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 NDUFS7O75251 213 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 C8BP07358 591 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 ACVR1BP36896 505 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 PMS2P3Q13401 168 aa16.22■□□□□ 0.19
CAPN1-203ENST00000525013 NRF1Q16656 503 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms