RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PRORYQ9H606 182 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CLMPQ9H6B4 373 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 REEP4Q9H6H4 257 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 GPN2Q9H9Y4 310 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 LIN28AQ9H9Z2 209 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ZBTB20Q9HC78 741 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SAR1AQ9NR31 198 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SDR39U1Q9NRG7 319 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PNO1Q9NRX1 252 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SNTG1Q9NSN8 517 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C14orf105Q9NVL8 296 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 FAM118AQ9NWS6 357 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TMEM160Q9NX00 188 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 P4HTMQ9NXG6 502 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TAS2R7Q9NYW3 318 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 AHSPQ9NZD4 102 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MAT2BQ9NZL9 334 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ARMCX1Q9P291 453 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PEMTQ9UBM1 199 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ATP6V1HQ9UI12 483 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TAGLN3Q9UI15 199 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF639Q9UID6 485 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PHF11Q9UIL8 331 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TMED5Q9Y3A6 229 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MMACHCQ9Y4U1 282 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CSAG2Q9Y5P2 127 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CSMD2Q7Z408 3487 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 COL6A6A6NMZ7 2263 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PHF3Q92576 2039 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 AKAP9Q99996 3911 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC168Q8NDH2 2452 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 IGKV3D-20A0A0C4DH25 116 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 C17orf51A8MQB3 221 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 C17orf105B2RV13 164 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FXYD1O00168 92 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PSMD12O00232 456 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 UPK1AO00322 258 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NR5A2O00482 541 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DVL1O14640 695 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 WDR1O75083 606 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PSMG1O95456 288 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NADKO95544 446 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GPR75O95800 540 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ATP1B1P05026 303 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SLC35E2P0CK97 266 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 TROVE2P10155 538 aaKnown RBP eCLIP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ACP2P11117 423 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CPMP14384 443 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 COX7A2P14406 83 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PORP16435 677 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NCF2P19878 526 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 EDN2P20800 178 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PRPS1L1P21108 318 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF10P21506 573 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 IL10P22301 178 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PIK3R1P27986 724 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 MAP3K8P41279 467 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ASMTP46597 345 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 EMDP50402 254 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ATP4BP51164 291 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NCBP2P52298 156 aaKnown RBP eCLIP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 POLR2JP52435 117 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DVL1P1P54792 670 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CASP9P55211 416 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 OR4D2P58180 307 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 EEF1A1P68104 462 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 HBA1P69905 142 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CBX1P83916 185 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PLIN5Q00G26 463 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 TGM3Q08188 693 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FUT5Q11128 374 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FUT7Q11130 342 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 HSPB3Q12988 150 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GAGE5Q13069 117 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GAGE6Q13070 117 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 MAD2L1Q13257 205 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 RCAN2Q14206 197 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SQLEQ14534 574 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 HEPACAMQ14CZ8 416 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 EBPQ15125 230 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NSDHLQ15738 373 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 MAPK11Q15759 364 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NNATQ16517 81 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GSTA3Q16772 222 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 COL28A1Q2UY09 1125 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DEFB109BQ30KR1 87 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF876PQ49A33 203 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 VPS26BQ4G0F5 336 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 AGKQ53H12 422 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DCAF10Q5QP82 559 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 EEF1A1P5Q5VTE0 462 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NIPAL1Q6NVV3 410 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 H3F3CQ6NXT2 135 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 TMEM107Q6UX40 140 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 KCTD8Q6ZWB6 473 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 IKBIPQ70UQ0 350 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NDUFAF7Q7L592 441 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SPATA21Q7Z572 469 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SPATA19Q7Z5L4 167 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GPAT4Q86UL3 456 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms