RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 FAM60AQ9NP50 221 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 NUDT15Q9NV35 164 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 MEMO1Q9Y316 297 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 A0A1W2PQ09 198 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 A0A1W2PQF6 199 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 MTRF1O75570 445 aaKnown RBP12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 CLEC2LP0C7M8 214 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 AMY2BP19961 511 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 CLDN12P56749 244 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 CHRFAM7AQ494W8 412 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 RPL22L1Q6P5R6 122 aaKnown RBP12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 SIMC1Q8NDZ2 872 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 MMP28Q9H239 520 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 DNAJC13O75165 2243 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 ICOSLGO75144 302 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 PTTG1O95997 202 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 PRSS3P35030 304 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 CAPZA1P52907 286 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 S100A10P60903 97 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 OR2I1PQ8NGU4 316 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 OR11A1Q9GZK7 315 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 DUSP21Q9H596 190 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF442Q9H7R0 627 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 CCDC59Q9P031 241 aaKnown RBP12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 PFDN2Q9UHV9 154 aa12.02□□□□□ -0.49
PCDHGB1-201ENST00000523390 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 RAD51DO75771 328 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 SELENOVP59797 346 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 GPR85P60893 370 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CD300CQ08708 224 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 FAM205BPQ63HN1 556 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 RAB11FIP2Q7L804 512 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 GRINAQ7Z429 371 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 LACC1Q8IV20 430 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 PM20D2Q8IYS1 436 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 FTMTQ8N4E7 242 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 PARP16Q8N5Y8 322 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 INO80EQ8NBZ0 244 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 OR5J2Q8NH18 312 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 HAVCR2Q8TDQ0 301 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF566Q969W8 418 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZG16BQ96DA0 208 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CCDC74BQ96LY2 380 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 UTP23Q9BRU9 249 aaKnown RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 OR2AT4A6NND4 320 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 L7N2F9 121 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 SPINT1O43278 529 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 YOD1Q5VVQ6 348 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 FAHD1Q6P587 224 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 RNF165Q6ZSG1 346 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 SIRT5Q9NXA8 310 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CTSFQ9UBX1 484 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF281Q9Y2X9 895 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CCL27Q9Y4X3 112 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 VSTM5A8MXK1 200 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 M0R082 166 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 GPRIN2O60269 458 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 EIF4E2O60573 245 aaKnown RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 AMY2AP04746 511 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 BMP4P12644 408 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 JUNBP17275 347 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 PTH2RP49190 550 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CCL7P80098 99 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 SRSF5Q13243 272 aaKnown RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 NKPD1Q17RQ9 610 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 DESI1Q6ICB0 168 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 GUSBP11Q6P575 273 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 LRRC18Q8N456 261 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 RADILQ96JH8 1075 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF587Q96SQ5 575 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 TEAD3Q99594 435 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 B3GNT3Q9Y2A9 372 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 OR14I1A6ND48 311 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 SELENOFO60613 162 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 NPR2P20594 1047 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 RBM34P42696 430 aaKnown RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 EMDP50402 254 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 RSU1Q15404 277 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 LAX1Q8IWV1 398 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 FAM26EQ8N5C1 309 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 THAP6Q8TBB0 222 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 C7orf34Q96L11 122 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 EMC6Q9BV81 110 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 CLEC1BQ9P126 229 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 POU2F3Q9UKI9 436 aa12.01□□□□□ -0.49
PCDHGB1-201ENST00000523390 hCG_1807616A0A1W2PRN6 198 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 MEN1O00255 615 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 CRTAPO75718 401 aaPredicted RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 AKR7A3O95154 331 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 HTR3BO95264 441 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 IGHEP01854 428 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZGLP1P0C6A0 271 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 SNRPBP14678 240 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms