RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TESQ9UGI8 421 aaKnown RBP16.36■□□□□ 0.21
SPIDR-220ENST00000522900 GDF2Q9UK05 429 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-220ENST00000522900 MGAT4BQ9UQ53 548 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 TRAV36DV7A0A075B6V5 113 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 A0A087WUJ7 227 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 A0A0B4J2E0 115 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 A0A1B0GX12 115 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 IGHV4-39P01824 125 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 HEXAP06865 529 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 PRPS1P60891 318 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 RBBP4Q09028 425 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 FAM69AQ5T7M9 428 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 FAM91A1Q658Y4 838 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 CGB2Q6NT52 195 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 OR1K1Q8NGR3 316 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 OR10A6Q8NH74 314 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 OXGR1Q96P68 337 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 ALKBH3Q96Q83 286 aaPredicted RBP16.35■□□□□ 0.21
SPIDR-220ENST00000522900 ARHGDIGQ99819 225 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 SLC13A4Q9UKG4 626 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 POU2F3Q9UKI9 436 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 B3GALT5Q9Y2C3 310 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 AMDHD2Q9Y303 409 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 CADP27708 2225 aa16.35■□□□□ 0.21
SPIDR-220ENST00000522900 MS4A18H0YCH9 400 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 OR2T1O43869 369 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF432O94892 652 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF43P17038 809 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 GTF2E2P29084 291 aaKnown RBP16.34■□□□□ 0.21
SPIDR-220ENST00000522900 TTKP33981 857 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 ACVR1BP36896 505 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 GZMMP51124 257 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 CDH12P55289 794 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 NCALDP61601 193 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 NPTX1Q15818 432 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 CLEC12BQ2HXU8 276 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 MS4A18Q3C1V0 323 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 TBRG1Q3YBR2 411 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 H1FNTQ75WM6 255 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-220ENST00000522900 NET1Q7Z628 596 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-220ENST00000522900 RBM45Q8IUH3 476 aaKnown RBP16.34■□□□□ 0.21
SPIDR-220ENST00000522900 BHLHE22Q8NFJ8 381 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-220ENST00000522900 OR4D11Q8NGI4 311 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 BCL2L2Q92843 193 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-220ENST00000522900 BOD1Q96IK1 185 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 MCHR1Q99705 422 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 DHRS9Q9BPW9 319 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 FGFR1OP2Q9NVK5 253 aa16.34■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF587BE7ETH6 402 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 LRRN3E7EW58 273 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 AIM2O14862 343 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 HPRP00739 348 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 BGLAPP02818 100 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 HLA-DOBP13765 273 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 C1DQ13901 141 aaKnown RBP16.33■□□□□ 0.2
SPIDR-220ENST00000522900 NRF1Q16656 503 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 RABL3Q5HYI8 236 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 NANOGP8Q6NSW7 305 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 C5orf46Q6UWT4 87 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 ABHD12BQ7Z5M8 362 aaPredicted RBP16.33■□□□□ 0.2
SPIDR-220ENST00000522900 MAPK1IP1LQ8NDC0 245 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 OR6T1Q8NGN1 323 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 ZNF837Q96EG3 531 aaPredicted RBP16.33■□□□□ 0.2
SPIDR-220ENST00000522900 MOGAT1Q96PD6 335 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 LINC00470Q9BZP3 86 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 GRIP2Q9C0E4 1043 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 ALG2Q9H553 416 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 NANOGQ9H9S0 305 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 FAIMQ9NVQ4 179 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 SELENONQ9NZV5 590 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 ATP23Q9Y6H3 246 aa16.33■□□□□ 0.2
SPIDR-220ENST00000522900 A0A096LPE4 126 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 A0A1W2PPZ6 126 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 FAM171A2A8MVW0 826 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 TRAF3IP2O43734 574 aaPredicted RBP16.32■□□□□ 0.2
SPIDR-220ENST00000522900 LYPD3O95274 346 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 WNT11O96014 354 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 THY1P04216 161 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 CD247P20963 164 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 FABP6P51161 128 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 CRYBA2P53672 197 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 TUBA1BP68363 451 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 TUBA4AP68366 448 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 ROR2Q01974 943 aaKnown RBP16.32■□□□□ 0.2
SPIDR-220ENST00000522900 KLF10Q13118 480 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 VEZF1Q14119 521 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 AGAP6Q5VW22 663 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 C11orf71Q6IPW1 123 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 LINC00114Q6XXX2 140 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 TUBA1AQ71U36 451 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 RANBP3LQ86VV4 465 aaPredicted RBP16.32■□□□□ 0.2
SPIDR-220ENST00000522900 TSPYL5Q86VY4 417 aaPredicted RBP16.32■□□□□ 0.2
SPIDR-220ENST00000522900 WDFY1Q8IWB7 410 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 DEPDC4Q8N2C3 294 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 VANGL1Q8TAA9 524 aaPredicted RBP16.32■□□□□ 0.2
SPIDR-220ENST00000522900 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 SLC41A3Q96GZ6 507 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 NELFAQ9H3P2 528 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 USP22Q9UPT9 525 aa16.32■□□□□ 0.2
SPIDR-220ENST00000522900 MOKQ9UQ07 419 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms