RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GOLGA7BQ2TAP0 167 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 DNAL1Q4LDG9 190 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 EIPR1Q53HC9 387 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 TPRG1LQ5T0D9 272 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZNF782Q6ZMW2 699 aaPredicted RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 PRSS48Q7RTY5 328 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZNF547Q8IVP9 402 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 BPIFB2Q8N4F0 458 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZNF114Q8NC26 417 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 OR6F1Q8NGZ6 308 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 MRAPQ8TCY5 172 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 UFD1Q92890 307 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 CELF6Q96J87 481 aaKnown RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 PPP1R36Q96LQ0 422 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZNF75AQ96N20 296 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZFP3Q96NJ6 502 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 OR5B2Q96R09 309 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 SELENOSQ9BQE4 189 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 PSD2Q9BQI7 771 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 RHNO1Q9BSD3 238 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ZYG11BQ9C0D3 744 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 PLEKHA3Q9HB20 300 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 PATZ1Q9HBE1 687 aaKnown RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 ESM1Q9NQ30 184 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 AGPAT4Q9NRZ5 378 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ELOVL2Q9NXB9 296 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ELOVL5Q9NYP7 299 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 B4GALT7Q9UBV7 327 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ASIC3Q9UHC3 531 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 ST6GALNAC2Q9UJ37 374 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 RCL1Q9Y2P8 373 aaKnown RBP3.42□□□□□ -1.86
SKP1-209ENST00000522552 SELENOKQ9Y6D0 94 aa3.42□□□□□ -1.86
SKP1-209ENST00000522552 FAM231BA6NCW3 169 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 MYMKA6NI61 221 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 VSTM2BA6NLU5 285 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 CENPBD1B2RD01 187 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 B8ZZF3 427 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 GFYI3L273 518 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 BCAR3O75815 825 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 RCBTB2O95199 551 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 LYPD3O95274 346 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 OXSR1O95747 527 aaPredicted RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 FGGP02679 453 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 HOXD4P09016 255 aaPredicted RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 FRMD6-AS1P0C7T7 363 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 SLC2A2P11168 524 aaPredicted RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 HLA-GP17693 338 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 HLA-DMAP28067 261 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 PSMB5P28074 263 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 SOX3P41225 446 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 DAP3P51398 398 aaKnown RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 POLR2GP62487 172 aaKnown RBP eCLIP3.41□□□□□ -1.86
SKP1-209ENST00000522552 GPR17Q13304 367 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 OR4D1Q15615 310 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 FAM189A2Q15884 450 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 TRMT5Q32P41 509 aaKnown RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 NDUFAF6Q330K2 333 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 CARD16Q5EG05 197 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 VWA2Q5GFL6 755 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 FAM120AOSQ5T036 256 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 WDR25Q64LD2 544 aaPredicted RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 PVRIGQ6DKI7 326 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.41□□□□□ -1.863e-9■■□□□ 12.3
SKP1-209ENST00000522552 MOB2Q70IA6 237 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 NUFIP2Q7Z417 695 aaKnown RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 UNC93AQ86WB7 457 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 ZNF677Q86XU0 584 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 ZNF786Q8N393 782 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 SLC16A11Q8NCK7 471 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 OR2T33Q8NG76 320 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 OR4C3Q8NH37 302 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 RPLP0P6Q8NHW5 317 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 DNAJB3Q8WWF6 145 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 CENPNQ96H22 339 aaPredicted RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 OXGR1Q96P68 337 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 EPYCQ99645 322 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 HSD17B14Q9BPX1 270 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 REEP4Q9H6H4 257 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 ATP13A3Q9H7F0 1226 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 METTL8Q9H825 291 aaKnown RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 ADGRL4Q9HBW9 690 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 SLC40A1Q9NP59 571 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 ACP6Q9NPH0 428 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 TAS2R16Q9NYV7 291 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 MAT2BQ9NZL9 334 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 WRAP73Q9P2S5 460 aaPredicted RBP3.41□□□□□ -1.86
SKP1-209ENST00000522552 VDAC3Q9Y277 283 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 INSL5Q9Y5Q6 135 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 TTC21AQ8NDW8 1320 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 ZNF521Q96K83 1311 aa3.41□□□□□ -1.86
SKP1-209ENST00000522552 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.4□□□□□ -1.86
SKP1-209ENST00000522552 RPS10-NUDT3A0A1W2PQS6 291 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 GOLGA6L10A6NI86 522 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 LINC01548A6NM66 108 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 IDSB3KWA1 339 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 K7EN84 100 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 PLPP1O14494 284 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 PRKYO43930 277 aa3.4□□□□□ -1.86
SKP1-209ENST00000522552 RAMP1O60894 148 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms