RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PIP5K1CO60331 668 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC2A10O95528 541 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 MPIG6BO95866 241 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 PRSS3P35030 304 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC6A8P48029 635 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 TPMTP51580 245 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZNF628Q5EBL2 1059 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 AWAT2Q6E213 333 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 OR7E24Q6IFN5 339 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 Q6ZNB5 142 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 TP53I13Q8NBR0 393 aaPredicted RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 VN1R2Q8NFZ6 395 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 INTS14Q96SY0 518 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 PBX4Q9BYU1 374 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 MED17Q9NVC6 651 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 GPATCH2Q9NW75 528 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 A4GNTQ9UNA3 340 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 NUPL2O15504 423 aaKnown RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 HRGP04196 525 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 CRABP1P29762 137 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 NUDT1P36639 197 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 PCGF3Q3KNV8 242 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SMUG1Q53HV7 270 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 TPRA1Q86W33 373 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 ADGRF3Q8IZF5 1079 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 C19orf47Q8N9M1 422 aaKnown RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 BBS1Q8NFJ9 593 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC37A2Q8TED4 501 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 TMEM255BQ8WV15 326 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SIGLEC11Q96RL6 698 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 FGF21Q9NSA1 209 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SPHK1Q9NYA1 384 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 VSX1Q9NZR4 365 aaPredicted RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SPAG17Q6Q759 2223 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZC3H12DA2A288 527 aaKnown RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 RAF1P04049 648 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 EIF4EP06730 217 aaKnown RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 REEP5Q00765 189 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 POU3F1Q03052 451 aaPredicted RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 METTL11BQ5VVY1 283 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 CD276Q5ZPR3 534 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 TMEM205Q6UW68 189 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 PPP1R3BQ86XI6 285 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 NKAIN4Q8IVV8 208 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 BEST3Q8N1M1 668 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 EID2Q8N6I1 236 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 ADAMTS14Q8WXS8 1223 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SGPP1Q9BX95 441 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 NRSN2Q9GZP1 204 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 CHST8Q9H2A9 424 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 PPA2Q9H2U2 334 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 SIDT1Q9NXL6 827 aaKnown RBP10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 RCE1Q9Y256 329 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 CEP250Q9BV73 2442 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 ARPC5O15511 151 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 APOC3P02656 99 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 LSSP48449 732 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZBTB37Q5TC79 503 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 C3P1Q6ZMU1 363 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 CFAP77Q6ZQR2 320 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC35D2Q76EJ3 337 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 SPAG16Q8N0X2 631 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 BOLLQ8N9W6 283 aaKnown RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 OR56B4Q8NH76 319 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 ABHD4Q8TB40 342 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 ELP4Q96EB1 424 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 NXF5Q9H1B4 397 aaKnown RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 PLEK2Q9NYT0 353 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 TRBV11-1A0A0K0K1C0 115 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 hCG_1807616A0A1W2PRN6 198 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 PHYHO14832 338 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 TMPRSS11DO60235 418 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 VASPP50552 380 aaPredicted RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 BTN1A1Q13410 526 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZXDCQ2QGD7 858 aaPredicted RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 TMEM52BQ4KMG9 183 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC48A1Q6P1K1 146 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 LSM14AQ8ND56 463 aaKnown RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 UCN3Q969E3 161 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 TCTN2Q96GX1 697 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC6A18Q96N87 628 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 C7orf50Q9BRJ6 194 aaKnown RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC23A2Q9UGH3 650 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 MLXQ9UH92 298 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 NTNG1Q9Y2I2 539 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 LRIT2A6NDA9 550 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 POM121CA8CG34 1229 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 OR8G3PP0DMU2 310 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 FPR3P25089 353 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 AQP2P41181 271 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 TRMT12Q53H54 448 aaKnown RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 VASNQ6EMK4 673 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 WBP2NLQ6ICG8 309 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 FAM160A2Q8N612 972 aaPredicted RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 CCL4L1Q8NHW4 92 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 NINJ1Q92982 152 aa10□□□□□ -0.81
PCDHGA1-202ENST00000517417 MRPL38Q96DV4 380 aaKnown RBP10□□□□□ -0.81
PCDHGA1-202ENST00000517417 LMF2Q9BU23 707 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms