RNA–Protein interactions for RNA: ENST00000513439.5

MTRR-223, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, human

TSL 1 (best)

Gene MTRR, Length 2,441 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTRR-223	ENST00000513439	MAPK14	Q16539	360 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	SFRP5	Q5T4F7	317 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	MEX3D	Q86XN8	651 aa	Known RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	AHCYL2	Q96HN2	611 aa	Known RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	ZNF285	Q96NJ3	590 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	EXOG	Q9Y2C4	368 aa	Known RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	ANXA2P2	A6NMY6	339 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	MCRIP1	C9JLW8	97 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	LRRN3	E7EW58	273 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	TGFBR3L	H3BV60	316 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	BCAT2	O15382	392 aa	Predicted RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	PRAF2	O60831	178 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	CBX7	O95931	251 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	IGHA1	P01876	353 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	IFI6	P09912	130 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	GABRA3	P34903	492 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	RPL35	P42766	123 aa	Known RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	AKR1D1	P51857	326 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	EEF1A1	P68104	462 aa	Known RBP	13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	S100A12	P80511	92 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	ST3GAL3	Q11203	375 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	ZNF619	Q8N2I2	560 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	LINC00469	Q8N7U9	141 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	OR52R1	Q8NGF1	315 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	MCHR1	Q99705	422 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	LRRN3	Q9H3W5	708 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	CAPN10	Q9HC96	672 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	PDE7B	Q9NP56	450 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	LRIT1	Q9P2V4	623 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	MGAT4C	Q9UBM8	478 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	CLEC4A	Q9UMR7	237 aa		13.4	□□□□□ -0.26
MTRR-223	ENST00000513439	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	SEC16A	O15027	2179 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	CTNS	O60931	367 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	NSA2	O95478	260 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	NTN1	O95631	604 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	S1PR1	P21453	382 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	FNTB	P49356	437 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	STX4	Q12846	297 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	DYRK1A	Q13627	763 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	HLX	Q14774	488 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	CLEC12A	Q5QGZ9	265 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	FIGNL1	Q6PIW4	674 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	C7orf57	Q8NEG2	295 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	CNOT9	Q92600	299 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	ZDHHC12	Q96GR4	267 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	LCOR	Q96JN0	433 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	GUCD1	Q96NT3	240 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	C12orf57	Q99622	126 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	ISG20L2	Q9H9L3	353 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	GPR160	Q9UJ42	338 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	KCNE5	Q9UJ90	142 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	FLVCR2	Q9UPI3	526 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	SIT1	Q9Y3P8	196 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	NPIPA5	A0A0B4J1W7	369 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	GXYLT2	A0PJZ3	443 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	OR2W5	A6NFC9	320 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	PRR23D1	E9PI22	279 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	NPIPA7	E9PJI5	369 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	SELENOF	O60613	162 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	RP2	O75695	350 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	THBS1	P07996	1170 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	NPIPA8	P0DM63	369 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	CALCR	P30988	508 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	AFF3	P51826	1226 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	OR1D5	P58170	312 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	GPR85	P60893	370 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	BTG2	P78543	158 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	BDH1	Q02338	343 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	KLF9	Q13886	244 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	TMEM44	Q2T9K0	475 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	AADACL4	Q5VUY2	407 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	METTL11B	Q5VVY1	283 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	EIF4E3	Q8N5X7	224 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	METTL27	Q8N6F8	245 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	ZNF454	Q8N9F8	522 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	MMAB	Q96EY8	250 aa	Predicted RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	RBM18	Q96H35	190 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	ART5	Q96L15	291 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	RAB33B	Q9H082	229 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	PRDM6	Q9NQX0	595 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	PIPOX	Q9P0Z9	390 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	EPHA6	Q9UF33	1036 aa		13.39	□□□□□ -0.27
MTRR-223	ENST00000513439	MRPS33	Q9Y291	106 aa	Known RBP	13.39	□□□□□ -0.27
MTRR-223	ENST00000513439		D6RAR5	112 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	PEX12	O00623	359 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	CH25H	O95992	272 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	THY1	P04216	161 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	DBI	P07108	87 aa	Known RBP	13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	RPS4Y1	P22090	263 aa	Known RBP	13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	S100A11	P31949	105 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	FAM27D1	Q5T7N8	215 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	TPRA1	Q86W33	373 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	NKAIN4	Q8IVV8	208 aa		13.38	□□□□□ -0.27
MTRR-223	ENST00000513439	PDZD9	Q8IXQ8	264 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms