RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SELENONQ9NZV5 590 aa20.12■□□□□ 0.81
SNF8-209ENST00000510558 NSD1Q96L73 2696 aaPredicted RBP20.11■□□□□ 0.81
SNF8-209ENST00000510558 TRAV36DV7A0A075B6V5 113 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 OR6C65A6NJZ3 312 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 M0R082 166 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 AIM2O14862 343 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 WNT11O96014 354 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 ZNF43P17038 809 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 CLDN17P56750 224 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 PRPS1P60891 318 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 OR1Q1Q15612 314 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 ETFDHQ16134 617 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 CLEC12BQ2HXU8 276 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 HIKESHIQ53FT3 197 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 B3GLCTQ6Y288 498 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 RANBP3LQ86VV4 465 aaPredicted RBP20.11■□□□□ 0.81
SNF8-209ENST00000510558 DEPDC4Q8N2C3 294 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 SMYD1Q8NB12 490 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 ZNF417Q8TAU3 575 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 BOD1Q96IK1 185 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 OXGR1Q96P68 337 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 ZNF587Q96SQ5 575 aaPredicted RBP20.11■□□□□ 0.81
SNF8-209ENST00000510558 TMEM120AQ9BXJ8 343 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 KLHL14Q9P2G3 628 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 B3GAT1Q9P2W7 334 aa20.11■□□□□ 0.81
SNF8-209ENST00000510558 A0A087WUJ7 227 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 A0A0B4J2E0 115 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 A0A1B0GX12 115 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 TPST2O60704 377 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 UPK3AO75631 287 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 LGI1O95970 557 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 OPN1SWP03999 348 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 PTNP21246 168 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 GRPRP30550 384 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 TNK1Q13470 666 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 VEZF1Q14119 521 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 AGAP6Q5VW22 663 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 LINGO2Q7L985 606 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 NET1Q7Z628 596 aaPredicted RBP20.1■□□□□ 0.81
SNF8-209ENST00000510558 OR1K1Q8NGR3 316 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 DHRS9Q9BPW9 319 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 LINC00470Q9BZP3 86 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 KAT8Q9H7Z6 458 aaKnown RBP20.1■□□□□ 0.81
SNF8-209ENST00000510558 RCE1Q9Y256 329 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 B3GALT5Q9Y2C3 310 aa20.1■□□□□ 0.81
SNF8-209ENST00000510558 M0QX08 132 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 M0R3H8 397 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 IGHV4-39P01824 125 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 CBLP22681 906 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 TTKP33981 857 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 TBRG1Q3YBR2 411 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 H1FNTQ75WM6 255 aaPredicted RBP20.09■□□□□ 0.81
SNF8-209ENST00000510558 OBP2BQ9NPH6 170 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 TLN2Q9Y4G6 2542 aa20.09■□□□□ 0.81
SNF8-209ENST00000510558 CSPG4Q6UVK1 2322 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 NDUFS7O75251 213 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 ZNF432O94892 652 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 TROVE2P10155 538 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNF8-209ENST00000510558 ACVR1BP36896 505 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 C1DQ13901 141 aaKnown RBP20.08■□□□□ 0.81
SNF8-209ENST00000510558 MFSD13AQ14CX5 517 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 NRF1Q16656 503 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 DUSP7Q16829 419 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 C11orf71Q6IPW1 123 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 SLC30A8Q8IWU4 369 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 FBXL14Q8N1E6 418 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 ADPRHL1Q8NDY3 354 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 GPR32P1Q8NGA4 272 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 OR6S1Q8NH40 331 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 OR10A6Q8NH74 314 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 HS6ST2Q96MM7 605 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 EPYCQ99645 322 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 MCHR1Q99705 422 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 ARHGDIGQ99819 225 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 FKRPQ9H9S5 495 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 CBLN4Q9NTU7 201 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 GDF2Q9UK05 429 aaPredicted RBP20.08■□□□□ 0.81
SNF8-209ENST00000510558 ATP23Q9Y6H3 246 aa20.08■□□□□ 0.81
SNF8-209ENST00000510558 FN1P02751 2386 aaKnown RBP20.08■□□□□ 0.8
SNF8-209ENST00000510558 FBP2O00757 339 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 SLC43A1O75387 559 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 PCGF2P35227 344 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 FABP6P51161 128 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 CDH12P55289 794 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 IL1RL1Q01638 556 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 ROR2Q01974 943 aaKnown RBP20.07■□□□□ 0.8
SNF8-209ENST00000510558 TRMT5Q32P41 509 aaKnown RBP20.07■□□□□ 0.8
SNF8-209ENST00000510558 SWT1Q5T5J6 900 aaKnown RBP20.07■□□□□ 0.8
SNF8-209ENST00000510558 HMBOX1Q6NT76 420 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 MUC15Q8N387 334 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 BCL2L2Q92843 193 aaPredicted RBP20.07■□□□□ 0.8
SNF8-209ENST00000510558 CACNG6Q9BXT2 260 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 FGFR1OP2Q9NVK5 253 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 CORINQ9Y5Q5 1042 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 CR1P17927 2039 aa20.07■□□□□ 0.8
SNF8-209ENST00000510558 LOC102725191A0A1B0GVB3 256 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 TRAF3IP2O43734 574 aaPredicted RBP20.06■□□□□ 0.8
SNF8-209ENST00000510558 FMO6PO60774 539 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 BGLAPP02818 100 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 C8BP07358 591 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms