RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 OR5H1A6NKK0 313 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 GABRPO00591 440 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 SLC16A7O60669 478 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 SLC25A27O95847 323 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR12D1P0DN82 309 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 INSRRP14616 1297 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 NT5EP21589 574 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 TNFSF4P23510 183 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 ITGB7P26010 798 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 DUSP1P28562 367 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 TACR3P29371 465 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 HOXA10P31260 410 aaPredicted RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 HOXA11P31270 313 aaPredicted RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 ADRA1BP35368 520 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 PBX2P40425 430 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR7A5Q15622 319 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 Q1RN00 199 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 PGGHGQ32M88 737 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 TEX44Q53QW1 395 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 MANEALQ5VSG8 457 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 KIAA0895LQ68EN5 471 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 ALKAL2Q6UX46 152 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 CCDC190Q86UF4 302 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 MAP4K3Q8IVH8 894 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 SLC35F2Q8IXU6 374 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 TMEM145Q8NBT3 493 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR5AR1Q8NGP9 310 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR52J3Q8NH60 311 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 CMTM2Q8TAZ6 248 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 ZNRF4Q8WWF5 429 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 RTN4IP1Q8WWV3 396 aaPredicted RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 GUCD1Q96NT3 240 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 WDFY2Q96P53 400 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR1F2PQ96R84 312 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 SIGMAR1Q99720 223 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 ZFYVE21Q9BQ24 234 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 SPXQ9BT56 116 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 JAM3Q9BX67 310 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 MAP1LC3BQ9GZQ8 125 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 WDR61Q9GZS3 305 aaKnown RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 SLC35B3Q9H1N7 401 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 SLC25A51Q9H1U9 297 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 LINC00597Q9H2U6 94 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR51B6Q9H340 312 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 LIN28AQ9H9Z2 209 aaKnown RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 ZBTB20Q9HC78 741 aaPredicted RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 SLC17A5Q9NRA2 495 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 AP5S1Q9NUS5 200 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 OR6C2Q9NZP2 312 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 GRHPRQ9UBQ7 328 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 COLEC10Q9Y6Z7 277 aa3.34□□□□□ -1.88
USP53-205ENST00000509769 ZNF646O15015 1829 aaPredicted RBP3.34□□□□□ -1.88
USP53-205ENST00000509769 A0A0U1RQJ8 604 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 A0A1B0GTQ1 180 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TCRBV21S2A2A0A5A6 115 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 C19orf67A6NJJ6 358 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZNF727A8MUV8 499 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GFRA3O60609 400 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZNF217O75362 1048 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ECI2O75521 394 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RHBDL1O75783 438 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 STBD1O95210 358 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CLIC3O95833 236 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PPP1R17O96001 155 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CYB5R3P00387 301 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 STAG3L1P0CL83 205 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LIMS3P0CW19 117 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LIMS4P0CW20 117 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ADORA3P0DMS8 318 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PRF1P14222 555 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 DRD2P14416 443 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CD44P16070 742 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 GLB1P16278 677 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 HIST1H1CP16403 213 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 ARNTP27540 789 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PSMB4P28070 264 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PBLDP30039 288 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 ACTR1AP61163 376 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 POLR2GP62487 172 aaKnown RBP eCLIP3.33□□□□□ -1.88
USP53-205ENST00000509769 TMEM249Q2WGJ8 235 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR2B11Q5JQS5 317 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PLAC9Q5JTB6 97 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RPUSD3Q6P087 351 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 CFAP161Q6P656 301 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NRARPQ7Z6K4 114 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZNF467Q7Z7K2 595 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 TMEM139Q8IV31 216 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PRSS35Q8N3Z0 413 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LRRN4CLQ8ND94 238 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NUDT10Q8NFP7 164 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR52E4Q8NGH9 312 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR6F1Q8NGZ6 308 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR2AE1Q8NHA4 323 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OXER1Q8TDS5 423 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ST8SIA2Q92186 375 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MAP1LC3CQ9BXW4 147 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MIR1-1HGQ9H1L0 117 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OPN3Q9H1Y3 402 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms